Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 SNORD1C-201ENST00000363315 78 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 RN7SKP129-201ENST00000410288 299 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 RN7SKP296-201ENST00000411185 341 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 AC013470.3-201ENST00000420252 1194 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 AL354766.1-201ENST00000423396 542 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SCN1BQ07699 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC091932.1-201ENST00000569381 427 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 MTND2P13-201ENST00000577438 1039 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 RN7SL131P-201ENST00000579043 256 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AL049840.5-201ENST00000602827 552 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC022387.2-201ENST00000604050 448 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC006328.2-201ENST00000623198 397 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 AC012005.2-201ENST00000624333 397 ntBASIC5.62□□□□□ -1.51
SCN1BQ07699 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.62□□□□□ -1.51
SCN1BQ07699 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SCN1BQ07699 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SCN1BQ07699 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SCN1BQ07699 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 RNA5SP478-201ENST00000364657 115 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AL359694.1-201ENST00000403247 604 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 SOD1P1-201ENST00000407803 440 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 RN7SKP151-201ENST00000410230 316 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 MICG-208ENST00000416822 132 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC000089.1-201ENST00000424559 801 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 DSTNP5-201ENST00000427921 523 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.61□□□□□ -1.51
SCN1BQ07699 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
SCN1BQ07699 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.61□□□□□ -1.51
SCN1BQ07699 OR11I1P-201ENST00000486033 954 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.61□□□□□ -1.51
SCN1BQ07699 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC010442.1-201ENST00000515583 816 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AP005902.2-201ENST00000518393 307 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN1BQ07699 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC027026.1-201ENST00000532323 742 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AC078878.1-201ENST00000539832 958 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AC092718.4-201ENST00000566639 716 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AL021368.3-201ENST00000607119 578 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN1BQ07699 AC093635.1-201ENST00000609028 555 ntBASIC5.61□□□□□ -1.51
SCN1BQ07699 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 481.7 ms