Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 RNU1-55P-201ENST00000365510 158 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A1P61619 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AL355143.1-201ENST00000407101 841 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SEC61A1P61619 RN7SKP146-201ENST00000410242 334 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 HMGA1P8-201ENST00000414130 321 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 FAR1P1-201ENST00000427163 934 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC096632.2-201ENST00000438139 1239 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC099670.1-201ENST00000455141 783 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC004890.1-201ENST00000461005 181 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 HMGN1P8-201ENST00000463578 288 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC015908.1-201ENST00000478739 476 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 TRBV8-1-201ENST00000481590 279 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 RPL7AP23-201ENST00000482625 776 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC112184.1-201ENST00000505179 312 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A1P61619 RNA5SP318-201ENST00000516352 92 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SEC61A1P61619 CR383656.14-201ENST00000551951 406 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AL158211.1-201ENST00000566763 763 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 BNIP3P19-201ENST00000605397 577 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC068726.1-201ENST00000610993 341 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 GAPDHP41-201ENST00000613707 975 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC022306.3-201ENST00000619930 550 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AC006249.1-201ENST00000621223 471 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
SEC61A1P61619 OR4G1P-202ENST00000641173 1788 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.59□□□□□ -1.51
SEC61A1P61619 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SEC61A1P61619 ZNF101P1-201ENST00000435701 1720 ntBASIC5.59□□□□□ -1.51
SEC61A1P61619 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SEC61A1P61619 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.59□□□□□ -1.52
SEC61A1P61619 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SEC61A1P61619 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.59□□□□□ -1.52
SEC61A1P61619 AL353763.1-201ENST00000624467 1628 ntBASIC5.59□□□□□ -1.52
SEC61A1P61619 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.59□□□□□ -1.52
SEC61A1P61619 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SEC61A1P61619 RNF19BPY-201ENST00000458209 1550 ntBASIC5.59□□□□□ -1.52
SEC61A1P61619 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.59□□□□□ -1.52
SEC61A1P61619 AC068446.1-201ENST00000556425 1549 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A1P61619 DNM1P47-203ENST00000571780 12667 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AC010624.4-201ENST00000597606 1351 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 RNA5SP140-201ENST00000364524 92 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 SNORA64.3-201ENST00000365647 134 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 RNU1-46P-201ENST00000384425 164 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 RPL23AP17-201ENST00000401064 499 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 CR848007.2-201ENST00000424918 787 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AL590623.1-201ENST00000427864 105 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC092106.2-201ENST00000436597 487 ntBASIC5.58□□□□□ -1.52
SEC61A1P61619 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.58□□□□□ -1.52
SEC61A1P61619 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SEC61A1P61619 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms