Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC004232.1-201ENST00000571388 208 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC024267.2-201ENST00000582737 417 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 AC005479.3-201ENST00000602790 431 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC005520.3-201ENST00000602874 370 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AL583832.1-201ENST00000603227 784 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC097467.4-201ENST00000605504 141 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC067838.1-201ENST00000606064 577 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC012213.4-201ENST00000606457 354 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC007620.3-201ENST00000608131 497 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 MIR6503-201ENST00000622884 86 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AC025262.3-201ENST00000623666 360 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AL035425.4-201ENST00000624509 1063 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 SNORA16A-202ENST00000628458 135 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.05□□□□□ -1.44
RPS3AP61247 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 RBPJP6-201ENST00000411556 1431 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.05□□□□□ -1.44
RPS3AP61247 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPS3AP61247 AC005332.9-201ENST00000620266 2921 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 AC010132.4-201ENST00000569883 1368 ntBASIC6.05□□□□□ -1.44
RPS3AP61247 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.05□□□□□ -1.44
RPS3AP61247 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.05□□□□□ -1.44
RPS3AP61247 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 AC003985.2-201ENST00000562268 1669 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC010894.1-201ENST00000313760 361 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPS3AP61247 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPS3AP61247 RNU1-5P-201ENST00000362684 144 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RNA5SP321-201ENST00000362722 111 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 SNORA38B-201ENST00000363524 131 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 AMZ2P2-201ENST00000406819 1057 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RN7SKP296-201ENST00000411185 341 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AC009506.2-201ENST00000420635 840 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AC245452.2-201ENST00000435222 392 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC083855.1-201ENST00000440041 258 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 PA2G4P1-201ENST00000442248 1197 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RPL5P10-201ENST00000445207 894 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AL121578.2-201ENST00000448797 447 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AKR1D1P1-201ENST00000457236 936 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RN7SL552P-201ENST00000462094 276 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RN7SL393P-201ENST00000463588 296 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 SUMO2P4-201ENST00000504193 276 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPS3AP61247 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.04□□□□□ -1.44
RPS3AP61247 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC007068.2-201ENST00000543168 395 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AC074029.2-201ENST00000551045 634 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.04□□□□□ -1.44
RPS3AP61247 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC6.04□□□□□ -1.44
RPS3AP61247 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 AL592494.3-201ENST00000609485 464 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 MIR6849-201ENST00000618543 69 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AL162233.1-201ENST00000620014 944 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 AC091948.2-201ENST00000636510 279 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPS3AP61247 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 SAMM50P1-201ENST00000455403 1399 ntBASIC6.04□□□□□ -1.44
RPS3AP61247 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.04□□□□□ -1.44
RPS3AP61247 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPS3AP61247 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.04□□□□□ -1.44
RPS3AP61247 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPS3AP61247 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPS3AP61247 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPS3AP61247 AC079753.1-201ENST00000623243 3868 ntBASIC6.03□□□□□ -1.44
RPS3AP61247 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.03□□□□□ -1.44
RPS3AP61247 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms