Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN6P56747 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN6P56747 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
CLDN6P56747 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.97□□□□□ -1.45
CLDN6P56747 NEK2P2-201ENST00000438441 1338 ntBASIC5.97□□□□□ -1.45
CLDN6P56747 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
CLDN6P56747 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLDN6P56747 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLDN6P56747 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
CLDN6P56747 AC119674.1-202ENST00000641333 1860 ntBASIC5.96□□□□□ -1.45
CLDN6P56747 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.45
CLDN6P56747 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.96□□□□□ -1.45
CLDN6P56747 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC5.96□□□□□ -1.45
CLDN6P56747 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
CLDN6P56747 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
CLDN6P56747 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC022325.1-201ENST00000502748 2199 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC5.96□□□□□ -1.46
CLDN6P56747 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLDN6P56747 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
CLDN6P56747 RNA5SP156-201ENST00000410250 110 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
CLDN6P56747 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.96□□□□□ -1.46
CLDN6P56747 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.96□□□□□ -1.46
CLDN6P56747 AL121776.1-201ENST00000429337 372 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 OR3D1P-201ENST00000438288 955 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC005077.1-201ENST00000449226 375 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC068522.1-201ENST00000482895 345 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 EIF3LP3-201ENST00000495197 822 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 NPM1P27-201ENST00000502784 830 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.96□□□□□ -1.46
CLDN6P56747 IGHV3-57-201ENST00000520143 280 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.96□□□□□ -1.46
CLDN6P56747 AP001858.2-201ENST00000536213 601 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.96□□□□□ -1.46
CLDN6P56747 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.96□□□□□ -1.46
CLDN6P56747 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.96□□□□□ -1.46
CLDN6P56747 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.96□□□□□ -1.46
CLDN6P56747 OR7E18P-201ENST00000592589 702 ntBASIC5.96□□□□□ -1.46
CLDN6P56747 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
CLDN6P56747 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLDN6P56747 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 RNU1-150P-201ENST00000362491 162 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN6P56747 RN7SKP161-201ENST00000411110 305 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC245096.1-201ENST00000413104 546 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 RPS14P4-201ENST00000415880 418 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN6P56747 AL512637.1-201ENST00000439523 1231 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 SEPT14P12-201ENST00000442280 560 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AL512593.1-201ENST00000444758 779 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 FTLP8-201ENST00000446770 267 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC117395.1-201ENST00000487390 403 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 OR51A1P-201ENST00000511110 946 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 OR4A13P-201ENST00000529316 942 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AP000662.1-201ENST00000530952 487 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC007225.2-201ENST00000562529 256 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.95□□□□□ -1.46
CLDN6P56747 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN6P56747 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN6P56747 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.95□□□□□ -1.46
CLDN6P56747 OR7A8P-201ENST00000595427 913 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 RPL12P48-201ENST00000605620 304 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC025171.4-201ENST00000607250 1047 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC004948.1-201ENST00000609858 672 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AL445647.2-201ENST00000615170 130 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 AC092724.1-201ENST00000624623 3397 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 WBP11P1-201ENST00000562560 1931 ntBASIC5.95□□□□□ -1.46
CLDN6P56747 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLDN6P56747 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.95□□□□□ -1.46
CLDN6P56747 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms