Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LIM2P55344 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.76□□□□□ -1.49
LIM2P55344 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.76□□□□□ -1.49
LIM2P55344 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 RNU105B-201ENST00000364478 208 ntBASIC5.76□□□□□ -1.49
LIM2P55344 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 AC016027.5-201ENST00000427227 210 ntBASIC5.76□□□□□ -1.49
LIM2P55344 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.76□□□□□ -1.49
LIM2P55344 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.76□□□□□ -1.49
LIM2P55344 ZNF619P1-201ENST00000446539 752 ntBASIC5.76□□□□□ -1.49
LIM2P55344 AC097463.1-201ENST00000447288 481 ntBASIC5.76□□□□□ -1.49
LIM2P55344 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.76□□□□□ -1.49
LIM2P55344 RN7SL352P-201ENST00000466002 277 ntBASIC5.76□□□□□ -1.49
LIM2P55344 RN7SL649P-201ENST00000496974 275 ntBASIC5.76□□□□□ -1.49
LIM2P55344 Vault.2-201ENST00000516519 98 ntBASIC5.76□□□□□ -1.49
LIM2P55344 SUMO2P19-201ENST00000518920 295 ntBASIC5.76□□□□□ -1.49
LIM2P55344 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.76□□□□□ -1.49
LIM2P55344 AC008429.4-201ENST00000521201 182 ntBASIC5.76□□□□□ -1.49
LIM2P55344 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.76□□□□□ -1.49
LIM2P55344 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.76□□□□□ -1.49
LIM2P55344 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.76□□□□□ -1.49
LIM2P55344 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.76□□□□□ -1.49
LIM2P55344 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.76□□□□□ -1.49
LIM2P55344 AC119674.1-202ENST00000641333 1860 ntBASIC5.76□□□□□ -1.49
LIM2P55344 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
LIM2P55344 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIM2P55344 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.76□□□□□ -1.49
LIM2P55344 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LIM2P55344 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
LIM2P55344 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
LIM2P55344 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
LIM2P55344 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC5.75□□□□□ -1.49
LIM2P55344 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIM2P55344 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
LIM2P55344 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 HSPD1P9-201ENST00000420325 1636 ntBASIC5.75□□□□□ -1.49
LIM2P55344 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.75□□□□□ -1.49
LIM2P55344 GNG5P2-201ENST00000372054 207 ntBASIC5.75□□□□□ -1.49
LIM2P55344 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC099535.1-201ENST00000408928 371 ntBASIC5.75□□□□□ -1.49
LIM2P55344 RPL12P12-201ENST00000424633 501 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AL353662.1-201ENST00000439099 327 ntBASIC5.75□□□□□ -1.49
LIM2P55344 RPSAP41-201ENST00000439695 860 ntBASIC5.75□□□□□ -1.49
LIM2P55344 FTLP8-201ENST00000446770 267 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC019084.1-201ENST00000457337 432 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 CYP4F27P-201ENST00000514557 494 ntBASIC5.75□□□□□ -1.49
LIM2P55344 RNA5SP473-201ENST00000516402 125 ntBASIC5.75□□□□□ -1.49
LIM2P55344 RN7SKP35-201ENST00000517210 151 ntBASIC5.75□□□□□ -1.49
LIM2P55344 TPM3P3-201ENST00000521343 354 ntBASIC5.75□□□□□ -1.49
LIM2P55344 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.75□□□□□ -1.49
LIM2P55344 AC024405.1-201ENST00000532521 1042 ntBASIC5.75□□□□□ -1.49
LIM2P55344 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.75□□□□□ -1.49
LIM2P55344 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.75□□□□□ -1.49
LIM2P55344 DPPA3P2-201ENST00000553589 478 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC026826.3-201ENST00000561747 158 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC092332.1-201ENST00000563684 829 ntBASIC5.75□□□□□ -1.49
LIM2P55344 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.75□□□□□ -1.49
LIM2P55344 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.75□□□□□ -1.49
LIM2P55344 AL645933.2-201ENST00000606743 1207 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC097641.3-201ENST00000613523 464 ntBASIC5.75□□□□□ -1.49
LIM2P55344 MIR7109-201ENST00000613748 65 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AC096861.1-201ENST00000616652 240 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AP001052.1-201ENST00000626421 99 ntBASIC5.75□□□□□ -1.49
LIM2P55344 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIM2P55344 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 RBMY1HP-201ENST00000382759 1389 ntBASIC5.75□□□□□ -1.49
LIM2P55344 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.75□□□□□ -1.49
LIM2P55344 AL137918.1-201ENST00000624542 1922 ntBASIC5.75□□□□□ -1.49
LIM2P55344 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.75□□□□□ -1.49
LIM2P55344 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
LIM2P55344 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.75□□□□□ -1.49
LIM2P55344 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.75□□□□□ -1.49
LIM2P55344 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.75□□□□□ -1.49
LIM2P55344 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.75□□□□□ -1.49
LIM2P55344 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.74□□□□□ -1.49
LIM2P55344 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LIM2P55344 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms