Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
GTF2A1P52655 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GTF2A1P52655 RN7SKP292-201ENST00000365522 317 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 SPATA20P1-201ENST00000423089 438 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF2A1P52655 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 MYL6P3-201ENST00000436904 432 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC004692.1-201ENST00000455430 424 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 RN7SL647P-201ENST00000485429 300 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AL135933.1-201ENST00000498657 802 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 EIF3KP1-201ENST00000513279 656 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 IGKV1D-22-201ENST00000518953 324 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AP002373.2-201ENST00000541631 1060 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 LINC02322-201ENST00000554773 338 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF2A1P52655 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.87□□□□□ -1.47
GTF2A1P52655 FRG2IP-201ENST00000563581 781 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AC026458.1-201ENST00000564330 438 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC005495.1-201ENST00000586611 1211 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC092032.1-201ENST00000603090 165 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AL356986.1-201ENST00000604085 341 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 AL031777.2-201ENST00000611953 196 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 MRPL57P1-201ENST00000621486 265 ntBASIC5.87□□□□□ -1.47
GTF2A1P52655 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF2A1P52655 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.87□□□□□ -1.47
GTF2A1P52655 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.87□□□□□ -1.47
GTF2A1P52655 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GTF2A1P52655 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GTF2A1P52655 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
GTF2A1P52655 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.87□□□□□ -1.47
GTF2A1P52655 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
GTF2A1P52655 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
GTF2A1P52655 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GTF2A1P52655 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
GTF2A1P52655 RAN-201ENST00000392367 780 ntTSL 5 BASIC5.86□□□□□ -1.47
GTF2A1P52655 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.86□□□□□ -1.47
GTF2A1P52655 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 PAICSP2-201ENST00000429118 1150 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 VDAC2P3-201ENST00000430995 828 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AC005517.1-201ENST00000452091 489 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 RSU1P1-201ENST00000453416 441 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 MED28P7-201ENST00000456611 530 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 RPL23AP64-201ENST00000469465 435 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 RPL21P6-201ENST00000479171 504 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 HMGB1P19-201ENST00000517578 577 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 AC140063.1-201ENST00000541343 259 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 NF1P12-201ENST00000549593 583 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC5.86□□□□□ -1.47
GTF2A1P52655 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.86□□□□□ -1.47
GTF2A1P52655 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AC100810.3-201ENST00000633189 2240 ntBASIC5.86□□□□□ -1.47
GTF2A1P52655 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC5.86□□□□□ -1.47
GTF2A1P52655 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
GTF2A1P52655 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
GTF2A1P52655 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
GTF2A1P52655 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.85□□□□□ -1.47
GTF2A1P52655 AC093225.1-201ENST00000506867 1408 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 STX3-208ENST00000641815 3236 ntBASIC5.85□□□□□ -1.47
GTF2A1P52655 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
GTF2A1P52655 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.85□□□□□ -1.47
GTF2A1P52655 MIR128-2-201ENST00000384893 84 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms