Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CASP4P49662 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CASP4P49662 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CASP4P49662 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CASP4P49662 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.59□□□□□ -1.35
CASP4P49662 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CASP4P49662 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.59□□□□□ -1.35
CASP4P49662 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
CASP4P49662 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CASP4P49662 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CASP4P49662 AC093829.1-201ENST00000506662 1618 ntBASIC6.58□□□□□ -1.36
CASP4P49662 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 OR10R3P-201ENST00000361688 942 ntBASIC6.58□□□□□ -1.36
CASP4P49662 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CASP4P49662 AL096711.1-201ENST00000404780 554 ntBASIC6.58□□□□□ -1.36
CASP4P49662 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 RPS7P8-201ENST00000418311 581 ntBASIC6.58□□□□□ -1.36
CASP4P49662 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.58□□□□□ -1.36
CASP4P49662 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 PNKDP1-201ENST00000435914 430 ntBASIC6.58□□□□□ -1.36
CASP4P49662 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 OR52I1-201ENST00000450052 1050 ntBASIC6.58□□□□□ -1.36
CASP4P49662 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.58□□□□□ -1.36
CASP4P49662 RPL23AP40-201ENST00000487630 390 ntBASIC6.58□□□□□ -1.36
CASP4P49662 RPL37P23-201ENST00000492641 294 ntBASIC6.58□□□□□ -1.36
CASP4P49662 CCDC11P1-201ENST00000503137 1162 ntBASIC6.58□□□□□ -1.36
CASP4P49662 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.58□□□□□ -1.36
CASP4P49662 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.58□□□□□ -1.36
CASP4P49662 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.58□□□□□ -1.36
CASP4P49662 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 FAM27E2-201ENST00000619668 403 ntBASIC6.58□□□□□ -1.36
CASP4P49662 AL591926.1-201ENST00000620542 217 ntBASIC6.58□□□□□ -1.36
CASP4P49662 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 AC073488.3-201ENST00000631611 778 ntBASIC6.58□□□□□ -1.36
CASP4P49662 CASC19-274ENST00000642018 970 ntBASIC6.58□□□□□ -1.36
CASP4P49662 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 AP003486.1-201ENST00000525716 3994 ntBASIC6.58□□□□□ -1.36
CASP4P49662 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
CASP4P49662 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CASP4P49662 AC073365.1-203ENST00000641055 1992 ntBASIC6.58□□□□□ -1.36
CASP4P49662 AC008627.1-201ENST00000517511 1704 ntBASIC6.58□□□□□ -1.36
CASP4P49662 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CASP4P49662 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CASP4P49662 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.58□□□□□ -1.36
CASP4P49662 IMMTP1-201ENST00000435590 2219 ntBASIC6.57□□□□□ -1.36
CASP4P49662 AP004289.1-201ENST00000436307 2205 ntBASIC6.57□□□□□ -1.36
CASP4P49662 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CASP4P49662 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.57□□□□□ -1.36
CASP4P49662 RN7SKP166-201ENST00000410812 305 ntBASIC6.57□□□□□ -1.36
CASP4P49662 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.57□□□□□ -1.36
CASP4P49662 H3F3BP1-201ENST00000440551 403 ntBASIC6.57□□□□□ -1.36
CASP4P49662 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.57□□□□□ -1.36
CASP4P49662 ACA64.4-201ENST00000459070 127 ntBASIC6.57□□□□□ -1.36
CASP4P49662 RN7SL741P-201ENST00000482473 289 ntBASIC6.57□□□□□ -1.36
CASP4P49662 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.57□□□□□ -1.36
CASP4P49662 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.57□□□□□ -1.36
CASP4P49662 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.57□□□□□ -1.36
CASP4P49662 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.57□□□□□ -1.36
CASP4P49662 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.57□□□□□ -1.36
CASP4P49662 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.57□□□□□ -1.36
CASP4P49662 AL845552.1-201ENST00000556820 323 ntBASIC6.57□□□□□ -1.36
CASP4P49662 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.57□□□□□ -1.36
CASP4P49662 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.57□□□□□ -1.36
CASP4P49662 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.57□□□□□ -1.36
CASP4P49662 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CASP4P49662 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms