Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 GLYATL1P2-202ENST00000588046 902 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 MIR6885-201ENST00000612241 66 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 GAPDHP41-201ENST00000613707 975 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AC241377.1-201ENST00000619797 406 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 AC024651.2-201ENST00000562480 2098 ntBASIC5.39□□□□□ -1.55
CX3CR1P49238 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CX3CR1P49238 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CX3CR1P49238 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.39□□□□□ -1.55
CX3CR1P49238 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC130360.2-201ENST00000533477 1556 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC027575.3-201ENST00000583058 2747 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 RNA5SP77-201ENST00000365394 120 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CR1P49238 PRELID1P1-201ENST00000403549 660 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 MTND2P12-201ENST00000417560 1252 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 RPL12P16-201ENST00000431098 498 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC234771.2-201ENST00000445718 597 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 RBMY2HP-201ENST00000457961 720 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 RN7SL352P-201ENST00000466002 277 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AL035690.1-201ENST00000490892 383 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC008945.1-201ENST00000505144 499 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 RNU2-45P-201ENST00000516068 187 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 CASP1P2-201ENST00000526830 1258 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 RNU4ATAC-201ENST00000580972 127 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AL591167.1-201ENST00000607321 456 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC022106.1-201ENST00000612834 766 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 AC089999.3-201ENST00000622440 577 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
CX3CR1P49238 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CX3CR1P49238 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CX3CR1P49238 AC024587.1-201ENST00000505925 2157 ntBASIC5.38□□□□□ -1.55
CX3CR1P49238 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CX3CR1P49238 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CX3CR1P49238 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CX3CR1P49238 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CX3CR1P49238 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 RNU6-673P-201ENST00000365084 104 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AL157702.1-201ENST00000398764 426 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 RN7SKP144-201ENST00000411108 279 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 RN7SKP17-201ENST00000411242 351 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.37□□□□□ -1.55
CX3CR1P49238 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CX3CR1P49238 NME1P1-201ENST00000420914 382 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AL354707.3-201ENST00000427308 331 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 AL731534.1-201ENST00000434711 269 ntBASIC5.37□□□□□ -1.55
CX3CR1P49238 RPS19P6-201ENST00000441327 433 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms