Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 COL6A4P2-205ENST00000509855 506 ntBASIC6.48□□□□□ -1.37
MMP13P45452 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP13P45452 CYCSP25-201ENST00000525280 316 ntBASIC6.48□□□□□ -1.37
MMP13P45452 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP13P45452 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 AC008055.1-201ENST00000547032 609 ntBASIC6.48□□□□□ -1.37
MMP13P45452 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP13P45452 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
MMP13P45452 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.48□□□□□ -1.37
MMP13P45452 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 AC009120.3-201ENST00000563335 499 ntBASIC6.48□□□□□ -1.37
MMP13P45452 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 NDUFB9P1-201ENST00000604683 510 ntBASIC6.48□□□□□ -1.37
MMP13P45452 BX322635.1-201ENST00000605804 496 ntBASIC6.48□□□□□ -1.37
MMP13P45452 AC034229.4-201ENST00000607861 441 ntBASIC6.48□□□□□ -1.37
MMP13P45452 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.48□□□□□ -1.37
MMP13P45452 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
MMP13P45452 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
MMP13P45452 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 AL136984.1-201ENST00000607611 1893 ntBASIC6.47□□□□□ -1.37
MMP13P45452 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 WDR95P-201ENST00000425638 1542 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC099654.3-201ENST00000447087 1546 ntBASIC6.47□□□□□ -1.37
MMP13P45452 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
MMP13P45452 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 ARMC4P1-201ENST00000438905 707 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 RBMY2AP-201ENST00000445405 1157 ntBASIC6.47□□□□□ -1.37
MMP13P45452 RBMY2CP-201ENST00000448575 1157 ntBASIC6.47□□□□□ -1.37
MMP13P45452 RBMY2DP-202ENST00000448881 1157 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 AL513343.1-201ENST00000451818 792 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP13P45452 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.47□□□□□ -1.37
MMP13P45452 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.47□□□□□ -1.37
MMP13P45452 OR9A1P-202ENST00000484361 945 ntBASIC6.47□□□□□ -1.37
MMP13P45452 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.47□□□□□ -1.37
MMP13P45452 AC090058.1-201ENST00000498788 435 ntBASIC6.47□□□□□ -1.37
MMP13P45452 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 RN7SKP157-201ENST00000516174 282 ntBASIC6.47□□□□□ -1.37
MMP13P45452 IGHV4-55-201ENST00000520889 368 ntBASIC6.47□□□□□ -1.37
MMP13P45452 MTND1P6-201ENST00000523621 946 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 BTG1P1-201ENST00000540396 508 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC009729.1-201ENST00000548873 1133 ntBASIC6.47□□□□□ -1.37
MMP13P45452 MIR3189-201ENST00000578735 73 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC126365.2-201ENST00000580630 379 ntBASIC6.47□□□□□ -1.37
MMP13P45452 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.47□□□□□ -1.37
MMP13P45452 AL589863.1-201ENST00000595383 631 ntBASIC6.47□□□□□ -1.37
MMP13P45452 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.47□□□□□ -1.37
MMP13P45452 AC011891.2-201ENST00000604949 397 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AL031658.2-201ENST00000616850 651 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
MMP13P45452 Z95114.1-201ENST00000624264 14574 ntBASIC6.47□□□□□ -1.37
MMP13P45452 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
MMP13P45452 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.47□□□□□ -1.37
MMP13P45452 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.46□□□□□ -1.37
MMP13P45452 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP13P45452 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
MMP13P45452 RNA5SP77-201ENST00000365394 120 ntBASIC6.46□□□□□ -1.38
MMP13P45452 RNU11-201ENST00000387069 134 ntBASIC6.46□□□□□ -1.38
MMP13P45452 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
MMP13P45452 RN7SKP199-201ENST00000410325 305 ntBASIC6.46□□□□□ -1.38
MMP13P45452 DHFRP2-201ENST00000414224 547 ntBASIC6.46□□□□□ -1.38
MMP13P45452 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.46□□□□□ -1.38
MMP13P45452 FAM183DP-201ENST00000421987 399 ntBASIC6.46□□□□□ -1.38
MMP13P45452 MTCYBP32-201ENST00000427945 1084 ntBASIC6.46□□□□□ -1.38
MMP13P45452 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms