Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTPN9P43378 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTPN9P43378 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PTPN9P43378 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 RN7SKP250-201ENST00000363924 321 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN9P43378 MIR188-201ENST00000385034 86 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN9P43378 RNA5SP251-201ENST00000410614 137 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 RANP7-201ENST00000418085 644 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 RPSAP32-201ENST00000432681 526 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AL590004.3-202ENST00000445883 451 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 MTND2P3-201ENST00000452458 470 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 RPL7L1P3-201ENST00000455249 689 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 HESX1-202ENST00000473921 757 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC128716.1-201ENST00000475129 166 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 RPL34P33-201ENST00000486062 334 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 SNX18P25-201ENST00000510539 758 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC090958.1-201ENST00000511122 351 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN9P43378 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 AC092865.1-201ENST00000544395 1023 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC090651.1-201ENST00000567865 634 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.47□□□□□ -1.37
PTPN9P43378 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 AP001823.1-201ENST00000604056 1003 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 RPSAP75-201ENST00000605848 301 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC007114.2-201ENST00000576014 4281 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 AC011416.1-201ENST00000514947 1732 ntBASIC6.47□□□□□ -1.37
PTPN9P43378 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN9P43378 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.46□□□□□ -1.37
PTPN9P43378 AC093297.3-201ENST00000607056 2517 ntBASIC6.46□□□□□ -1.37
PTPN9P43378 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
PTPN9P43378 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN9P43378 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN9P43378 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN9P43378 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN9P43378 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.46□□□□□ -1.38
PTPN9P43378 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN9P43378 AL360271.1-201ENST00000395679 510 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN9P43378 RN7SKP144-201ENST00000411108 279 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN9P43378 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN9P43378 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN9P43378 THEM7P-201ENST00000419556 672 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN9P43378 IGLV3-4-201ENST00000432300 244 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 OR3D1P-201ENST00000438288 955 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AC017099.1-201ENST00000448261 1028 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 TAAR4P-201ENST00000454843 1039 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AC073594.1-201ENST00000462065 364 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
PTPN9P43378 AC106822.1-201ENST00000502647 526 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN9P43378 RNA5SP434-201ENST00000516647 121 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 Y_RNA.710-201ENST00000516975 110 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN9P43378 AP003080.1-202ENST00000526526 915 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AP003033.2-201ENST00000528901 805 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.46□□□□□ -1.38
PTPN9P43378 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.46□□□□□ -1.38
PTPN9P43378 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.46□□□□□ -1.38
PTPN9P43378 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.46□□□□□ -1.38
PTPN9P43378 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN9P43378 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.46□□□□□ -1.38
PTPN9P43378 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.46□□□□□ -1.38
PTPN9P43378 RN7SL230P-201ENST00000580835 303 ntBASIC6.46□□□□□ -1.38
PTPN9P43378 AC020916.2-201ENST00000591242 360 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms