Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AL136295.6-201ENST00000610486 658 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
TM4SF1P30408 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
TM4SF1P30408 AC117409.1-201ENST00000470499 1310 ntBASIC7.49□□□□□ -1.21
TM4SF1P30408 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC7.49□□□□□ -1.21
TM4SF1P30408 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
TM4SF1P30408 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 PARP4P2-201ENST00000446672 3326 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 MIR1286-201ENST00000408112 78 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 RN7SKP29-201ENST00000410957 272 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.48□□□□□ -1.21
TM4SF1P30408 AL390119.1-201ENST00000440329 312 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 RPS7P3-201ENST00000443360 580 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 BZW1P1-201ENST00000454901 1240 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 RN7SL72P-201ENST00000460697 269 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 AC008953.1-201ENST00000497334 318 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 RNU6-615P-201ENST00000516065 106 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 RNA5SP92-201ENST00000516437 110 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.48□□□□□ -1.21
TM4SF1P30408 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 MIR5095-201ENST00000578844 88 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.48□□□□□ -1.21
TM4SF1P30408 FKBP1AP1-201ENST00000594588 318 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
TM4SF1P30408 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
TM4SF1P30408 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 AC009831.5-201ENST00000624000 3189 ntBASIC7.48□□□□□ -1.21
TM4SF1P30408 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
TM4SF1P30408 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.48□□□□□ -1.21
TM4SF1P30408 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.47□□□□□ -1.21
TM4SF1P30408 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
TM4SF1P30408 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 MIR640-201ENST00000385086 96 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.47□□□□□ -1.21
TM4SF1P30408 NME1P1-201ENST00000420914 382 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 AC005297.1-201ENST00000444765 862 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.47□□□□□ -1.21
TM4SF1P30408 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC7.47□□□□□ -1.21
TM4SF1P30408 RPL23AP60-201ENST00000450011 454 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 OTX2P1-201ENST00000450956 354 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC007386.1-201ENST00000455212 582 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC093166.4-201ENST00000457867 318 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC006499.3-201ENST00000506077 748 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.47□□□□□ -1.21
TM4SF1P30408 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 OR4A46P-201ENST00000527255 933 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.47□□□□□ -1.21
TM4SF1P30408 IGBP1P1-201ENST00000554337 1009 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 AC013731.1-201ENST00000604340 883 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 AC007683.2-201ENST00000624681 714 ntBASIC7.47□□□□□ -1.21
TM4SF1P30408 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.47□□□□□ -1.21
TM4SF1P30408 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
TM4SF1P30408 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
TM4SF1P30408 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms