Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.68□□□□□ -1.5
NCK1P16333 AC009567.2-201ENST00000502989 349 ntBASIC5.68□□□□□ -1.5
NCK1P16333 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.68□□□□□ -1.5
NCK1P16333 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.68□□□□□ -1.5
NCK1P16333 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.68□□□□□ -1.5
NCK1P16333 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
NCK1P16333 AC089984.3-201ENST00000552838 363 ntBASIC5.68□□□□□ -1.5
NCK1P16333 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.68□□□□□ -1.5
NCK1P16333 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.68□□□□□ -1.5
NCK1P16333 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.68□□□□□ -1.5
NCK1P16333 MIR378H-201ENST00000579966 83 ntBASIC5.68□□□□□ -1.5
NCK1P16333 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
NCK1P16333 AL589743.6-201ENST00000611025 117 ntBASIC5.68□□□□□ -1.5
NCK1P16333 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.68□□□□□ -1.5
NCK1P16333 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.68□□□□□ -1.5
NCK1P16333 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.68□□□□□ -1.5
NCK1P16333 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
NCK1P16333 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 CDY11P-201ENST00000447168 1651 ntBASIC5.68□□□□□ -1.5
NCK1P16333 AC024651.2-201ENST00000562480 2098 ntBASIC5.68□□□□□ -1.5
NCK1P16333 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
NCK1P16333 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 AC079248.1-201ENST00000427568 1546 ntBASIC5.68□□□□□ -1.5
NCK1P16333 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
NCK1P16333 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NCK1P16333 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AC020656.2-201ENST00000613291 5309 ntBASIC5.67□□□□□ -1.5
NCK1P16333 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 RNA5SP346-201ENST00000363541 121 ntBASIC5.67□□□□□ -1.5
NCK1P16333 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 RN7SKP166-201ENST00000410812 305 ntBASIC5.67□□□□□ -1.5
NCK1P16333 RNA5SP155-201ENST00000411154 129 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AL139135.1-201ENST00000412675 209 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.67□□□□□ -1.5
NCK1P16333 EMC3-AS1-205ENST00000438698 534 ntBASIC5.67□□□□□ -1.5
NCK1P16333 RPS10P14-201ENST00000440748 502 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 RPSAP40-201ENST00000442343 891 ntBASIC5.67□□□□□ -1.5
NCK1P16333 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.67□□□□□ -1.5
NCK1P16333 Z83838.1-202ENST00000456225 839 ntBASIC5.67□□□□□ -1.5
NCK1P16333 RPL12P31-201ENST00000478433 450 ntBASIC5.67□□□□□ -1.5
NCK1P16333 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 AC130366.1-201ENST00000526505 1192 ntBASIC5.67□□□□□ -1.5
NCK1P16333 LDHC-204ENST00000536880 957 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 RPL41P2-201ENST00000544920 409 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 FXYD6P1-201ENST00000604857 285 ntBASIC5.67□□□□□ -1.5
NCK1P16333 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 MIR8082-201ENST00000612488 81 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AL589935.2-201ENST00000616471 1231 ntBASIC5.67□□□□□ -1.5
NCK1P16333 MIR6736-201ENST00000616799 59 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 EIF3EP1-201ENST00000433978 1316 ntBASIC5.67□□□□□ -1.5
NCK1P16333 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
NCK1P16333 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
NCK1P16333 NCOA4P2-201ENST00000340589 1813 ntBASIC5.67□□□□□ -1.5
NCK1P16333 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
NCK1P16333 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
NCK1P16333 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NCK1P16333 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NCK1P16333 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.66□□□□□ -1.5
NCK1P16333 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.66□□□□□ -1.5
NCK1P16333 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NCK1P16333 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.66□□□□□ -1.5
NCK1P16333 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NCK1P16333 AC026523.2-201ENST00000625039 7739 ntBASIC5.66□□□□□ -1.5
NCK1P16333 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NCK1P16333 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
NCK1P16333 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms