Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AL353763.1-201ENST00000624467 1628 ntBASIC6.17□□□□□ -1.42
PCNAP12004 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.17□□□□□ -1.42
PCNAP12004 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCNAP12004 PROS2P-201ENST00000474651 1951 ntBASIC6.17□□□□□ -1.42
PCNAP12004 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 DNM1P47-203ENST00000571780 12667 ntBASIC6.16□□□□□ -1.42
PCNAP12004 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 SNORD8-201ENST00000363915 110 ntBASIC6.16□□□□□ -1.42
PCNAP12004 ARSFP1-201ENST00000398758 477 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AL589994.1-201ENST00000404962 340 ntBASIC6.16□□□□□ -1.42
PCNAP12004 UBE2V1P14-201ENST00000415815 558 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.16□□□□□ -1.42
PCNAP12004 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 MTATP6P11-201ENST00000428071 670 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 AL645939.3-201ENST00000435408 225 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AC010086.1-201ENST00000437359 1052 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.16□□□□□ -1.42
PCNAP12004 WDR82P2-201ENST00000444540 928 ntBASIC6.16□□□□□ -1.42
PCNAP12004 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.16□□□□□ -1.42
PCNAP12004 RN7SL83P-201ENST00000468131 297 ntBASIC6.16□□□□□ -1.42
PCNAP12004 RN7SL502P-201ENST00000481857 290 ntBASIC6.16□□□□□ -1.42
PCNAP12004 RWDD4P1-201ENST00000488019 565 ntBASIC6.16□□□□□ -1.42
PCNAP12004 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.16□□□□□ -1.42
PCNAP12004 AC015524.1-201ENST00000491585 472 ntBASIC6.16□□□□□ -1.42
PCNAP12004 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.16□□□□□ -1.42
PCNAP12004 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 RPL3P13-201ENST00000550415 216 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC6.16□□□□□ -1.42
PCNAP12004 AL121579.2-201ENST00000555466 590 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AC023968.1-201ENST00000560719 475 ntBASIC6.16□□□□□ -1.42
PCNAP12004 CCDC58P1-201ENST00000578567 430 ntBASIC6.16□□□□□ -1.42
PCNAP12004 AC022387.2-201ENST00000604050 448 ntBASIC6.16□□□□□ -1.42
PCNAP12004 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 U91328.4-201ENST00000608919 517 ntBASIC6.16□□□□□ -1.42
PCNAP12004 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.16□□□□□ -1.42
PCNAP12004 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 AC011815.2-201ENST00000618230 2021 ntBASIC6.16□□□□□ -1.42
PCNAP12004 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCNAP12004 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCNAP12004 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PCNAP12004 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.15□□□□□ -1.42
PCNAP12004 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
PCNAP12004 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PCNAP12004 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 SNORD16-201ENST00000362803 99 ntBASIC6.15□□□□□ -1.42
PCNAP12004 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCNAP12004 MT-RNR1-201ENST00000389680 954 ntBASIC6.15□□□□□ -1.42
PCNAP12004 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.15□□□□□ -1.42
PCNAP12004 RPS17P17-201ENST00000419392 409 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.15□□□□□ -1.42
PCNAP12004 AC009237.1-201ENST00000442127 744 ntBASIC6.15□□□□□ -1.42
PCNAP12004 GAPDHP37-201ENST00000442317 968 ntBASIC6.15□□□□□ -1.42
PCNAP12004 CYCSP51-201ENST00000443545 318 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC6.15□□□□□ -1.42
PCNAP12004 AL356390.1-201ENST00000455684 397 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AC090589.1-201ENST00000473109 362 ntBASIC6.15□□□□□ -1.42
PCNAP12004 RN7SL165P-201ENST00000477476 291 ntBASIC6.15□□□□□ -1.42
PCNAP12004 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 COL6A4P2-205ENST00000509855 506 ntBASIC6.15□□□□□ -1.42
PCNAP12004 NPM1P21-201ENST00000513394 762 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.15□□□□□ -1.42
PCNAP12004 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.15□□□□□ -1.42
PCNAP12004 COX6B1P4-201ENST00000519826 484 ntBASIC6.15□□□□□ -1.42
PCNAP12004 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.15□□□□□ -1.42
PCNAP12004 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.15□□□□□ -1.42
PCNAP12004 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.15□□□□□ -1.42
PCNAP12004 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.15□□□□□ -1.42
PCNAP12004 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.15□□□□□ -1.42
PCNAP12004 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.15□□□□□ -1.42
PCNAP12004 HNRNPCP1-201ENST00000556181 766 ntBASIC6.15□□□□□ -1.42
PCNAP12004 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCNAP12004 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms