Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
UBCP0CG48 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UBCP0CG48 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UBCP0CG48 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.4□□□□□ -1.55
UBCP0CG48 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
UBCP0CG48 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.4□□□□□ -1.55
UBCP0CG48 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBCP0CG48 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBCP0CG48 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 AL121977.1-201ENST00000401636 979 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 OR52N3P-201ENST00000413417 934 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC002127.1-201ENST00000421305 225 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AL354766.1-201ENST00000423396 542 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 GPN3P1-201ENST00000423883 535 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 AC083855.1-201ENST00000440041 258 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 GAPDHP37-201ENST00000442317 968 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 RN7SL284P-201ENST00000498823 275 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC009567.2-201ENST00000502989 349 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.39□□□□□ -1.55
UBCP0CG48 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 OR9G2P-201ENST00000533326 880 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC092865.1-201ENST00000544395 1023 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 AL049779.3-201ENST00000557141 606 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 RN7SL475P-201ENST00000583379 298 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 AL136097.3-201ENST00000611097 505 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 AC010998.3-201ENST00000613871 631 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 AL137067.2-201ENST00000621202 131 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBCP0CG48 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.39□□□□□ -1.55
UBCP0CG48 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
UBCP0CG48 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.39□□□□□ -1.55
UBCP0CG48 CAP1P2-201ENST00000417455 1409 ntBASIC5.39□□□□□ -1.55
UBCP0CG48 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.39□□□□□ -1.55
UBCP0CG48 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UBCP0CG48 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.38□□□□□ -1.55
UBCP0CG48 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
UBCP0CG48 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBCP0CG48 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBCP0CG48 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBCP0CG48 AC092634.1-201ENST00000366505 199 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 MIR138-2-201ENST00000384916 84 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 MIR27A-201ENST00000385073 78 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 RN7SKP121-201ENST00000410842 305 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.38□□□□□ -1.55
UBCP0CG48 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.38□□□□□ -1.55
UBCP0CG48 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.38□□□□□ -1.55
UBCP0CG48 SOCS5P1-201ENST00000440415 949 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 GAPDHP23-201ENST00000444823 993 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 AL161722.1-201ENST00000446972 1032 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBCP0CG48 RPL23AP60-201ENST00000450011 454 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC5.38□□□□□ -1.55
UBCP0CG48 RNU7-157P-201ENST00000459600 66 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 RN7SL655P-201ENST00000486087 298 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC5.38□□□□□ -1.55
UBCP0CG48 AC026782.2-201ENST00000510845 636 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 KHDC1P1-201ENST00000511053 508 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.38□□□□□ -1.55
UBCP0CG48 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBCP0CG48 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.38□□□□□ -1.55
UBCP0CG48 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.38□□□□□ -1.55
UBCP0CG48 AC026898.1-201ENST00000586404 571 ntBASIC5.38□□□□□ -1.55
UBCP0CG48 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
UBCP0CG48 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms