Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CD48P09326 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.27□□□□□ -1.41
CD48P09326 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CD48P09326 RN7SKP184-201ENST00000362348 333 ntBASIC6.27□□□□□ -1.41
CD48P09326 RN7SKP171-201ENST00000364417 303 ntBASIC6.27□□□□□ -1.41
CD48P09326 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CD48P09326 AC121334.1-201ENST00000396414 802 ntBASIC6.27□□□□□ -1.41
CD48P09326 AL132875.1-201ENST00000403623 949 ntBASIC6.27□□□□□ -1.41
CD48P09326 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.27□□□□□ -1.41
CD48P09326 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.27□□□□□ -1.41
CD48P09326 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.27□□□□□ -1.41
CD48P09326 RPSAP65-201ENST00000429660 595 ntBASIC6.27□□□□□ -1.41
CD48P09326 AC010240.2-201ENST00000445363 1205 ntBASIC6.27□□□□□ -1.41
CD48P09326 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 AC002553.3-201ENST00000453002 341 ntBASIC6.27□□□□□ -1.41
CD48P09326 RPS27P20-201ENST00000492051 246 ntBASIC6.27□□□□□ -1.41
CD48P09326 RN7SL568P-201ENST00000493069 298 ntBASIC6.27□□□□□ -1.41
CD48P09326 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC6.27□□□□□ -1.41
CD48P09326 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.27□□□□□ -1.41
CD48P09326 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.27□□□□□ -1.41
CD48P09326 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.27□□□□□ -1.41
CD48P09326 AC119403.2-201ENST00000590960 598 ntBASIC6.27□□□□□ -1.41
CD48P09326 AC073333.2-201ENST00000603589 769 ntBASIC6.27□□□□□ -1.41
CD48P09326 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.27□□□□□ -1.41
CD48P09326 AC096861.1-201ENST00000616652 240 ntBASIC6.27□□□□□ -1.41
CD48P09326 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.41
CD48P09326 AL592429.1-201ENST00000403909 1473 ntBASIC6.27□□□□□ -1.41
CD48P09326 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
CD48P09326 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CD48P09326 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CD48P09326 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 SYT14P1-202ENST00000600441 1448 ntBASIC6.26□□□□□ -1.41
CD48P09326 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD48P09326 OR10R3P-201ENST00000361688 942 ntBASIC6.26□□□□□ -1.41
CD48P09326 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 RPL35AP31-201ENST00000418340 337 ntBASIC6.26□□□□□ -1.41
CD48P09326 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 AL139158.1-201ENST00000424719 340 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC092651.1-201ENST00000426110 312 ntBASIC6.26□□□□□ -1.41
CD48P09326 AL365220.1-201ENST00000432923 399 ntBASIC6.26□□□□□ -1.41
CD48P09326 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
CD48P09326 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 RBMY2BP-202ENST00000451071 1156 ntBASIC6.26□□□□□ -1.41
CD48P09326 SDC4P-201ENST00000453285 601 ntBASIC6.26□□□□□ -1.41
CD48P09326 CCDC11P1-201ENST00000503137 1162 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC092349.1-201ENST00000504903 310 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.26□□□□□ -1.41
CD48P09326 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 OR4A41P-201ENST00000533053 928 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC121758.1-202ENST00000556917 658 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 AC233699.1-201ENST00000569955 1168 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 AC079791.1-201ENST00000605356 973 ntBASIC6.26□□□□□ -1.41
CD48P09326 uc_338.31-201ENST00000615595 186 ntBASIC6.26□□□□□ -1.41
CD48P09326 MIR6721-201ENST00000617181 87 ntBASIC6.26□□□□□ -1.41
CD48P09326 AL357562.1-201ENST00000624911 609 ntBASIC6.26□□□□□ -1.41
CD48P09326 AC111152.1-202ENST00000635848 339 ntBASIC6.26□□□□□ -1.41
CD48P09326 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 EIF3EP2-201ENST00000423042 1814 ntBASIC6.26□□□□□ -1.41
CD48P09326 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 AL162456.1-201ENST00000634535 2006 ntBASIC6.26□□□□□ -1.41
CD48P09326 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.26□□□□□ -1.41
CD48P09326 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
CD48P09326 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
CD48P09326 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.26□□□□□ -1.41
CD48P09326 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CD48P09326 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CD48P09326 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms