Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 MAPK10-347ENST00000641762 2856 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 PDZK1P1-202ENST00000425209 1350 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDGFAP04085 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
PDGFAP04085 CR848007.1-201ENST00000442354 1699 ntBASIC7.32□□□□□ -1.24
PDGFAP04085 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 UGT2B4-206ENST00000512583 1836 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 ZNF512-203ENST00000413371 3703 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 GANC-206ENST00000566442 2512 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 MIR135B-201ENST00000362189 97 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RNU6-621P-201ENST00000364752 109 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PDGFAP04085 MIR27A-201ENST00000385073 78 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 SNORD65.1-201ENST00000390889 71 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RNU6-244P-201ENST00000391028 104 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 RN7SKP117-201ENST00000410175 264 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC092745.2-202ENST00000411880 369 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RPS26P38-201ENST00000414476 348 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RPL23AP39-201ENST00000415533 405 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AL513325.1-201ENST00000417716 1034 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RPL7P44-201ENST00000424827 742 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 FTH1P10-202ENST00000430907 550 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 TMX2P1-201ENST00000436507 708 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC7.31□□□□□ -1.24
PDGFAP04085 RPL29P7-201ENST00000440227 457 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 TCEA1P3-201ENST00000443005 880 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC005297.1-201ENST00000444765 862 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RPL7L1P11-201ENST00000446092 721 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AL592447.1-201ENST00000447592 540 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 PNPLA4P1-201ENST00000458328 305 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RN7SL145P-201ENST00000469955 296 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC055758.2-202ENST00000482351 624 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 RN7SL335P-201ENST00000482790 304 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 VPS26AP1-201ENST00000483197 979 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 HNRNPA1P44-201ENST00000503999 879 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC073648.3-201ENST00000504939 925 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 IGHV3-63-201ENST00000518422 341 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 RPL10P19-201ENST00000519013 301 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 IGHVII-49-1-201ENST00000521760 224 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDGFAP04085 RPS3AP4-201ENST00000555161 764 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.31□□□□□ -1.24
PDGFAP04085 RPL23AP77-201ENST00000588044 463 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC7.31□□□□□ -1.24
PDGFAP04085 AC008385.1-201ENST00000604421 355 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC022001.1-201ENST00000605193 268 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC112220.3-201ENST00000605502 502 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC103724.4-201ENST00000605981 292 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AL133351.5-201ENST00000612789 106 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 MIR6774-201ENST00000614651 70 ntBASIC7.31□□□□□ -1.24
PDGFAP04085 AC010333.3-201ENST00000615100 402 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms