Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MAPRE1P3-201ENST00000435438 796 ntBASIC5.75□□□□□ -1.49
SSX4O60224 PFN1P11-201ENST00000445829 389 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX4O60224 RPL23AP28-201ENST00000448062 470 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AC093827.1-201ENST00000480094 861 ntBASIC5.75□□□□□ -1.49
SSX4O60224 RPL23AP68-201ENST00000480924 445 ntBASIC5.75□□□□□ -1.49
SSX4O60224 OR52A4P-202ENST00000481634 799 ntBASIC5.75□□□□□ -1.49
SSX4O60224 RN7SL382P-201ENST00000482631 282 ntBASIC5.75□□□□□ -1.49
SSX4O60224 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 RN7SL413P-201ENST00000482700 297 ntBASIC5.75□□□□□ -1.49
SSX4O60224 RPL37P23-201ENST00000492641 294 ntBASIC5.75□□□□□ -1.49
SSX4O60224 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX4O60224 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 OR4A42P-201ENST00000531397 938 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX4O60224 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX4O60224 AC007068.2-201ENST00000543168 395 ntBASIC5.75□□□□□ -1.49
SSX4O60224 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 AC005519.1-201ENST00000554490 601 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX4O60224 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.75□□□□□ -1.49
SSX4O60224 AC020915.5-201ENST00000596836 964 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AL360012.1-201ENST00000602813 131 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AC022387.2-201ENST00000604050 448 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AC011891.2-201ENST00000604949 397 ntBASIC5.75□□□□□ -1.49
SSX4O60224 OR7M1P-201ENST00000608946 533 ntBASIC5.75□□□□□ -1.49
SSX4O60224 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.75□□□□□ -1.49
SSX4O60224 AC010333.3-201ENST00000615100 402 ntBASIC5.75□□□□□ -1.49
SSX4O60224 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AP001153.1-201ENST00000641024 338 ntBASIC5.75□□□□□ -1.49
SSX4O60224 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SSX4O60224 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.75□□□□□ -1.49
SSX4O60224 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 CUL4AP1-201ENST00000514750 1863 ntBASIC5.75□□□□□ -1.49
SSX4O60224 AC232271.1-201ENST00000602455 2715 ntBASIC5.75□□□□□ -1.49
SSX4O60224 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SSX4O60224 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 AC140479.2-201ENST00000421567 3130 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SSX4O60224 RNU6-386P-201ENST00000362650 107 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RNU1-65P-201ENST00000363919 148 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RNA5SP140-201ENST00000364524 92 ntBASIC5.74□□□□□ -1.49
SSX4O60224 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 GNG5P2-201ENST00000372054 207 ntBASIC5.74□□□□□ -1.49
SSX4O60224 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.74□□□□□ -1.49
SSX4O60224 RNA5SP474-201ENST00000391234 90 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AL136116.2-201ENST00000404020 785 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RN7SKP161-201ENST00000411110 305 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AC096644.3-201ENST00000416788 338 ntBASIC5.74□□□□□ -1.49
SSX4O60224 PAICSP2-201ENST00000429118 1150 ntBASIC5.74□□□□□ -1.49
SSX4O60224 OR6R1P-201ENST00000431838 940 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RSL24D1P8-201ENST00000434442 492 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX4O60224 RPL5P10-201ENST00000445207 894 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AC007383.1-201ENST00000445875 636 ntBASIC5.74□□□□□ -1.49
SSX4O60224 CCNJP1-201ENST00000450600 1149 ntBASIC5.74□□□□□ -1.49
SSX4O60224 MEF2AP1-201ENST00000454867 863 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 AC104339.1-201ENST00000465478 348 ntBASIC5.74□□□□□ -1.49
SSX4O60224 SNRPCP3-201ENST00000474888 476 ntBASIC5.74□□□□□ -1.49
SSX4O60224 RN7SL170P-201ENST00000487098 295 ntBASIC5.74□□□□□ -1.49
SSX4O60224 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SSX4O60224 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.74□□□□□ -1.49
SSX4O60224 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX4O60224 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.74□□□□□ -1.49
SSX4O60224 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.74□□□□□ -1.49
SSX4O60224 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX4O60224 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.74□□□□□ -1.49
SSX4O60224 AC140063.1-201ENST00000541343 259 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.74□□□□□ -1.49
SSX4O60224 AC009729.1-201ENST00000548873 1133 ntBASIC5.74□□□□□ -1.49
SSX4O60224 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.74□□□□□ -1.49
SSX4O60224 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms