Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 CASC19-260ENST00000641828 2001 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.75□□□□□ -1.49
UPK1AO00322 AL355488.2-201ENST00000609909 2850 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 ZNF969P-201ENST00000510345 2341 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 AC232271.1-201ENST00000602455 2715 ntBASIC5.75□□□□□ -1.49
UPK1AO00322 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
UPK1AO00322 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
UPK1AO00322 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
UPK1AO00322 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 SAMMSON-210ENST00000641260 1308 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 AL731532.1-201ENST00000623972 4236 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.74□□□□□ -1.49
UPK1AO00322 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 MIR188-201ENST00000385034 86 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
UPK1AO00322 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.74□□□□□ -1.49
UPK1AO00322 AL354868.1-201ENST00000417077 482 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 OSBPL10-AS1-203ENST00000428872 538 ntTSL 3 BASIC5.74□□□□□ -1.49
UPK1AO00322 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.74□□□□□ -1.49
UPK1AO00322 TRBV5-2-201ENST00000489095 273 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.74□□□□□ -1.49
UPK1AO00322 RNA5SP434-201ENST00000516647 121 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.74□□□□□ -1.49
UPK1AO00322 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.74□□□□□ -1.49
UPK1AO00322 AC141002.1-201ENST00000607025 279 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 PCA3_2.1-201ENST00000612507 409 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.74□□□□□ -1.49
UPK1AO00322 RN7SL261P-201ENST00000613441 282 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
UPK1AO00322 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.74□□□□□ -1.49
UPK1AO00322 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
UPK1AO00322 AC005224.3-201ENST00000584683 2140 ntBASIC5.74□□□□□ -1.49
UPK1AO00322 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
UPK1AO00322 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 AL161756.3-201ENST00000641216 2071 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
UPK1AO00322 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
UPK1AO00322 PPBPP2-201ENST00000513150 1362 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 RN7SKP108-201ENST00000411367 328 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 PTCD2P2-201ENST00000415579 1095 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 AC099782.1-201ENST00000425889 474 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.73□□□□□ -1.49
UPK1AO00322 RPSAP32-201ENST00000432681 526 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 OR3D1P-201ENST00000438288 955 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC007383.1-201ENST00000445875 636 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AL162739.1-201ENST00000450606 307 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 Z83838.1-202ENST00000456225 839 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 OR7E22P-201ENST00000478335 1035 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.73□□□□□ -1.49
UPK1AO00322 RPL12P30-201ENST00000488389 499 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC106822.1-201ENST00000502647 526 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.73□□□□□ -1.49
UPK1AO00322 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.73□□□□□ -1.49
UPK1AO00322 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.73□□□□□ -1.49
UPK1AO00322 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.73□□□□□ -1.49
UPK1AO00322 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.73□□□□□ -1.49
UPK1AO00322 AP005136.2-201ENST00000583253 1049 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC011500.1-201ENST00000601963 469 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AL135999.3-201ENST00000610501 812 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 AC069542.2-201ENST00000624816 216 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 MARK2P4-201ENST00000503381 2380 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 AC027279.4-201ENST00000624371 2072 ntBASIC5.73□□□□□ -1.49
UPK1AO00322 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
UPK1AO00322 NLRP3P1-201ENST00000622303 1785 ntBASIC5.72□□□□□ -1.49
UPK1AO00322 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms