Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HMGB1P1B2RPK0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC125238.2-201ENST00000430003 1440 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC083843.2-201ENST00000568248 6253 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AMZ2P2-201ENST00000406819 1057 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 HSPE1P16-201ENST00000426640 348 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AL365220.1-201ENST00000432923 399 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AL590128.1-201ENST00000433407 286 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC083855.1-201ENST00000440041 258 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 CLIC4P1-201ENST00000453177 535 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 RN7SL515P-201ENST00000463999 297 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 RPS26P6-201ENST00000475156 348 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 RPL5P3-201ENST00000493817 889 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 OR4F28P-201ENST00000559128 938 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 NPM1P42-201ENST00000560329 862 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AP001357.1-201ENST00000586304 1053 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 OR4F8P-201ENST00000589943 937 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 SRD5A3-AS1-212ENST00000601433 754 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC006363.1-201ENST00000603806 463 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC005070.2-201ENST00000604391 260 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LINC00216-201ENST00000623548 1126 ntBASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.52□□□□□ -1.37
HMGB1P1B2RPK0 AL355488.2-201ENST00000609909 2850 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 FBXL21-201ENST00000297158 1305 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 PSMC1P4-201ENST00000515236 1327 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 GUCY1B2-204ENST00000531898 1979 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AL078621.3-201ENST00000623707 2042 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 OR2AT4-201ENST00000305159 1042 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 RPS3AP5-201ENST00000389400 821 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 RNA5SP53-201ENST00000391299 120 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 AC048351.1-201ENST00000420064 602 ntBASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 Z99758.1-201ENST00000432081 368 ntTSL 3 BASIC6.51□□□□□ -1.37
HMGB1P1B2RPK0 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms