Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
C4orf47A7E2U8 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
C4orf47A7E2U8 AC016251.2-201ENST00000623393 3089 ntBASIC6.21□□□□□ -1.42
C4orf47A7E2U8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.21□□□□□ -1.42
C4orf47A7E2U8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC073429.2-201ENST00000569694 1444 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RNFT1P3-201ENST00000340898 1052 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 MIR105-2-201ENST00000385083 81 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 U3.43-201ENST00000410734 213 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RN7SKP293-201ENST00000411389 296 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC016908.1-201ENST00000442571 1219 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RPS27AP2-201ENST00000457576 465 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RN7SL515P-201ENST00000463999 297 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 OR5D2P-201ENST00000524390 911 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 GTF2IP11-201ENST00000526931 420 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC004232.1-201ENST00000571388 208 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AP001823.1-201ENST00000604056 1003 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC108673.3-201ENST00000609183 335 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AP000864.1-201ENST00000609424 650 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AC112243.1-201ENST00000623949 3851 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 RAD17P2-201ENST00000451754 1977 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 AL591848.4-201ENST00000567832 3472 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
C4orf47A7E2U8 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.2□□□□□ -1.42
C4orf47A7E2U8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC093278.2-201ENST00000564956 2485 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 SAGE3P-201ENST00000619800 1635 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 MIR143-201ENST00000385300 106 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 RANP7-201ENST00000418085 644 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 RPL23AP85-201ENST00000421838 433 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AL163193.1-201ENST00000444895 788 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 RN7SL610P-201ENST00000463845 291 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 RN7SL714P-201ENST00000487050 298 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 MTND6P8-201ENST00000503471 522 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC083906.1-201ENST00000509298 406 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 RNA5SP362-201ENST00000516048 118 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AP006245.2-201ENST00000522004 300 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 IGKV2-18-201ENST00000522607 343 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC090236.2-201ENST00000587933 1101 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC020916.2-201ENST00000591242 360 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC005332.4-201ENST00000592752 579 ntBASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.19□□□□□ -1.42
C4orf47A7E2U8 AP003789.1-201ENST00000617737 605 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms