Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
COL4A3BPQ9Y5P4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AP000866.6-201ENST00000638898 3579 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LCOR-201ENST00000286067 4542 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LRRC37A15P-201ENST00000514785 1355 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AL591848.4-201ENST00000567832 3472 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 GCNT6-201ENST00000379591 934 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 U3.52-201ENST00000384034 216 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 VIM2P-201ENST00000402383 1294 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 NPM1P37-201ENST00000403105 874 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 BX119321.1-201ENST00000428912 797 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 GAPDHP33-201ENST00000443168 1013 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 RPL23AP23-201ENST00000452590 471 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 RPL5P13-201ENST00000462840 709 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC098818.1-201ENST00000478593 252 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC023818.1-201ENST00000498379 384 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC093870.1-201ENST00000506837 213 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC073581.1-201ENST00000519036 575 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC116917.1-201ENST00000520558 305 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AP003102.1-201ENST00000525638 661 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AP001000.1-201ENST00000526843 742 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC012653.2-201ENST00000621880 420 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 SNX18P10-201ENST00000625014 519 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 CDC27P2-201ENST00000425026 1922 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC112243.1-201ENST00000623949 3851 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 TCP1P3-201ENST00000414406 1498 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 OSBPL9P1-201ENST00000604744 1469 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC107021.2-201ENST00000567714 2095 ntBASIC7.36□□□□□ -1.23
COL4A3BPQ9Y5P4 AC022905.1-201ENST00000503430 3048 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RNU6-792P-201ENST00000363490 107 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RNU6-31P-201ENST00000384388 108 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RNU6-1263P-201ENST00000384601 106 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AL929472.1-201ENST00000417484 429 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 RPL7AP51-201ENST00000422016 760 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 OR6R1P-201ENST00000431838 940 ntBASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC7.35□□□□□ -1.23
COL4A3BPQ9Y5P4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms