Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 MIR433-201ENST00000384837 93 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 VIM2P-201ENST00000402383 1294 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 RN7SKP151-201ENST00000410230 316 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 OR5W1P-201ENST00000423705 938 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 PRUNEP1-201ENST00000425846 705 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC092651.1-201ENST00000426110 312 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 REG1CP-206ENST00000447469 496 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AL445991.1-201ENST00000450381 475 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC010343.2-201ENST00000510162 224 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC009729.1-201ENST00000548873 1133 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 MIR212-201ENST00000586026 110 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 NPIPB1P-202ENST00000588786 828 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC006924.1-201ENST00000610750 559 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 MIR7159-201ENST00000620587 66 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC003992.1-201ENST00000635364 557 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 MSL3P1-202ENST00000440028 1468 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC217777.1-201ENST00000570034 1471 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AP001541.1-201ENST00000623322 1904 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 AC097063.1-201ENST00000426714 1797 ntBASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RHBDD3Q9Y3P4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AL136984.1-201ENST00000607611 1893 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 RNA5SP485-201ENST00000365053 119 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC003045.1-201ENST00000398779 713 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AL121977.1-201ENST00000401636 979 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 REREP1Y-201ENST00000422655 198 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 RPEP4-201ENST00000437636 602 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 REREP2Y-201ENST00000439103 200 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 COX4I1P2-201ENST00000447446 547 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 IGHV4-55-201ENST00000520889 368 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC008055.1-201ENST00000547032 609 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC025283.1-201ENST00000572039 734 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 RN7SL66P-201ENST00000582099 264 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC073869.7-201ENST00000640874 297 ntBASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.41□□□□□ -1.54
RHBDD3Q9Y3P4 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms