Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC026124.2-201ENST00000621847 656 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 UBA3-213ENST00000631029 123 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 MELK-211ENST00000545008 2236 ntTSL 2 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 AC027088.4-201ENST00000611559 1947 ntBASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC8.13□□□□□ -1.11
NPC1L1Q9UHC9 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AC005225.5-201ENST00000623547 2225 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 SUGT1P2-201ENST00000379452 992 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 RPS14P4-201ENST00000415880 418 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 ATP5LP2-201ENST00000440646 311 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 SLC25A51P1-201ENST00000468432 871 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AC083795.1-201ENST00000491760 320 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 Y_RNA.667-201ENST00000516212 107 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AL356801.1-201ENST00000559320 294 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AC119501.1-201ENST00000603646 475 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AL512356.3-201ENST00000623005 461 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 LRRC37A16P-202ENST00000586022 3725 ntBASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NPC1L1Q9UHC9 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AC098847.1-201ENST00000473094 348 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AC091078.2-201ENST00000557145 559 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AC018558.5-201ENST00000565840 952 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 SNX18P12-201ENST00000624821 759 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 EEF1A1P21-201ENST00000512363 1344 ntBASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC8.11□□□□□ -1.11
NPC1L1Q9UHC9 AL096800.1-201ENST00000405326 893 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 NDUFS5P5-201ENST00000437256 321 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 CUBNP2-201ENST00000443534 1139 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 RPL38P3-201ENST00000484463 213 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC018659.2-201ENST00000624690 715 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AC129915.3-201ENST00000634128 948 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 AL669831.5-218ENST00000591702 1873 ntBASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NPC1L1Q9UHC9 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms