Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC137056.2-201ENST00000624055 1958 ntBASIC7.33□□□□□ -1.24
CLIP2Q9UDT6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
CLIP2Q9UDT6 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.33□□□□□ -1.24
CLIP2Q9UDT6 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 QRSL1P1-201ENST00000400977 1540 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RNA5SP514-201ENST00000363717 111 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RN7SKP275-201ENST00000364626 301 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RBMY2AP-201ENST00000445405 1157 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC097463.1-201ENST00000447288 481 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RBMY2CP-201ENST00000448575 1157 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RBMY2DP-202ENST00000448881 1157 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RBMY2BP-202ENST00000451071 1156 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC002075.1-201ENST00000457396 676 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RN7SKP67-201ENST00000515905 235 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 Y_RNA.710-201ENST00000516975 110 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AP001858.2-201ENST00000536213 601 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC073333.2-201ENST00000603589 769 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC006924.1-201ENST00000610750 559 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC092266.1-201ENST00000610958 165 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 FAM27E2-201ENST00000619668 403 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 MAPK10-261ENST00000641050 3109 ntBASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.32□□□□□ -1.24
CLIP2Q9UDT6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 NPM1P25-201ENST00000429734 854 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 DNAJA1P5-201ENST00000440278 943 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 EIF5AP4-201ENST00000441206 465 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RPL6P30-201ENST00000443382 862 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC092967.1-201ENST00000449016 481 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC068228.1-201ENST00000461723 211 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RPL12P24-201ENST00000474907 486 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC128716.1-201ENST00000475129 166 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 LDHAP1-201ENST00000509421 992 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC092332.1-201ENST00000563684 829 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC021422.1-201ENST00000621212 473 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC011369.2-201ENST00000624423 1567 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 MAPK10-287ENST00000641217 3037 ntBASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
CLIP2Q9UDT6 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms