Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 AC003992.1-201ENST00000635364 557 ntBASIC7.79□□□□□ -1.16
CNTN3Q9P232 AC099654.13-201ENST00000639774 207 ntBASIC7.79□□□□□ -1.16
CNTN3Q9P232 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 NXF4-202ENST00000416098 1465 ntBASIC7.79□□□□□ -1.16
CNTN3Q9P232 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.79□□□□□ -1.16
CNTN3Q9P232 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CNTN3Q9P232 AL008638.3-201ENST00000623027 5182 ntBASIC7.79□□□□□ -1.16
CNTN3Q9P232 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC007938.1-201ENST00000562524 2902 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC006058.1-201ENST00000568686 5067 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 SNORA70.5-201ENST00000365519 135 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RNU6-413P-201ENST00000384115 107 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RPL24P7-201ENST00000399435 453 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RSL24D1P4-201ENST00000400938 484 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AL133325.1-201ENST00000421090 382 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC233982.1-201ENST00000451247 436 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 PSPC1P2-201ENST00000455130 225 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 WBP1LP1-201ENST00000460451 896 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RPSAP48-201ENST00000466509 889 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC091982.1-202ENST00000473923 343 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC008885.2-201ENST00000509506 930 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 LINC01085-203ENST00000511195 326 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC008549.1-201ENST00000512900 643 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AP001803.1-201ENST00000525668 147 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 BTG1P1-201ENST00000540396 508 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 NBEAP1-201ENST00000554452 979 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC068135.2-201ENST00000569293 1028 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 PPIAP14-201ENST00000577627 496 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 PRR13P5-201ENST00000596581 442 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 VN1R7P-201ENST00000619242 903 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.78□□□□□ -1.16
CNTN3Q9P232 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 CD86-209ENST00000493101 1572 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CNTN3Q9P232 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CNTN3Q9P232 HLF-210ENST00000575345 3589 ntTSL 2 BASIC7.77□□□□□ -1.16
CNTN3Q9P232 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.77□□□□□ -1.17
CNTN3Q9P232 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 NPIPB4-203ENST00000415645 3606 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CNTN3Q9P232 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.77□□□□□ -1.17
CNTN3Q9P232 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC7.77□□□□□ -1.17
CNTN3Q9P232 UGT2B25P-201ENST00000511504 1586 ntBASIC7.77□□□□□ -1.17
CNTN3Q9P232 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CNTN3Q9P232 PARN-201ENST00000341484 2100 ntTSL 2 BASIC7.77□□□□□ -1.17
CNTN3Q9P232 RNU12-2P-201ENST00000364789 156 ntBASIC7.77□□□□□ -1.17
CNTN3Q9P232 SNORD116.1-201ENST00000365628 92 ntBASIC7.77□□□□□ -1.17
CNTN3Q9P232 MCTS2P-201ENST00000394552 546 ntBASIC7.77□□□□□ -1.17
CNTN3Q9P232 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms