Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC104164.1-201ENST00000460282 590 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RPS27P20-201ENST00000492051 246 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AP002453.1-201ENST00000492327 668 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RN7SL612P-201ENST00000497704 295 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 OR4A41P-201ENST00000533053 928 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC073389.3-201ENST00000609434 935 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AL109924.4-201ENST00000623089 670 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 ZNF658B-201ENST00000602828 3408 ntBASIC6.44□□□□□ -1.38
SIX2Q9NPC8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SIX2Q9NPC8 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 RN7SKP171-201ENST00000364417 303 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AL353662.1-201ENST00000439099 327 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 RPS7P3-201ENST00000443360 580 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 snoU13.29-201ENST00000459370 104 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 RN7SL269P-201ENST00000467795 305 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 MAST4-IT1-201ENST00000514241 658 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 snoU109.5-201ENST00000516231 132 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 RN7SKP35-201ENST00000517210 151 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 IGKV3D-25-201ENST00000519599 235 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC110056.1-201ENST00000525759 911 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC121758.1-202ENST00000556917 658 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC007346.1-201ENST00000569208 867 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AL352984.2-202ENST00000613699 155 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 MIR6721-201ENST00000617181 87 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 AL354854.1-201ENST00000455940 1363 ntBASIC6.43□□□□□ -1.38
SIX2Q9NPC8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SIX2Q9NPC8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC008627.1-201ENST00000517511 1704 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RN7SKP77-201ENST00000363261 353 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL590399.2-201ENST00000427536 309 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 KRT8P51-201ENST00000438938 274 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 TRIM60P16-201ENST00000444048 694 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL603882.1-201ENST00000463059 681 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC098799.1-201ENST00000504752 800 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC113367.2-201ENST00000505749 160 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC091874.2-201ENST00000505889 720 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL158068.1-201ENST00000506116 616 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC018797.1-201ENST00000510791 255 ntBASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.42□□□□□ -1.38
SIX2Q9NPC8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 311.6 ms