Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AC016027.4-201ENST00000450866 277 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ACA64.1-201ENST00000459171 127 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 RNA5SP271-201ENST00000516700 88 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AC027667.1-201ENST00000545814 304 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 MIR6793-201ENST00000612376 63 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AC096861.1-201ENST00000616652 240 ntBASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.6□□□□□ -1.35
NXF3Q9H4D5 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AL096800.1-201ENST00000405326 893 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 RN7SKP161-201ENST00000411110 305 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 PCBP2P1-201ENST00000437262 977 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 RN7SL269P-201ENST00000467795 305 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 IGKV3D-34-201ENST00000522638 302 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 MIR3614-201ENST00000581261 86 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC005244.1-201ENST00000582566 339 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC020916.2-201ENST00000591242 360 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AL512356.3-201ENST00000623005 461 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AL596275.2-208ENST00000641192 594 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AC008691.1-209ENST00000642094 814 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 AOX3P-204ENST00000491025 2107 ntBASIC6.59□□□□□ -1.35
NXF3Q9H4D5 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
NXF3Q9H4D5 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.59□□□□□ -1.36
NXF3Q9H4D5 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
NXF3Q9H4D5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.36
NXF3Q9H4D5 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.59□□□□□ -1.36
NXF3Q9H4D5 AL359091.1-201ENST00000449048 1734 ntBASIC6.59□□□□□ -1.36
NXF3Q9H4D5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
NXF3Q9H4D5 LINC01616-201ENST00000561816 2280 ntBASIC6.59□□□□□ -1.36
NXF3Q9H4D5 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 AC119674.1-213ENST00000641177 1386 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 AC023490.2-201ENST00000359859 470 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 RNU105B-201ENST00000364478 208 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 RPL35AP3-201ENST00000414680 288 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 NPM1P36-201ENST00000415681 835 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.58□□□□□ -1.36
NXF3Q9H4D5 BX284632.2-201ENST00000421091 399 ntBASIC6.58□□□□□ -1.36
NXF3Q9H4D5 BX323845.3-201ENST00000428215 527 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms