Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MIR4310-201ENST00000582950 57 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL445435.1-201ENST00000604232 665 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC009974.1-201ENST00000608881 455 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC025016.1-201ENST00000616746 682 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 AC005753.1-201ENST00000623837 618 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 RPL31P11-201ENST00000426558 1558 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 PSMC1P6-201ENST00000477233 1319 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 CASC19-228ENST00000641414 1684 ntBASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
AMBRA1Q9C0C7 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 LCOR-201ENST00000286067 4542 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MIR191-201ENST00000384873 92 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MIR99A-201ENST00000384906 81 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MIR323B-201ENST00000385269 82 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL049697.3-201ENST00000406493 982 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 VN1R51P-201ENST00000411675 945 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 BMS1P13-201ENST00000417301 885 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 YWHAZP5-201ENST00000419975 730 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 GAPDHP57-201ENST00000424400 585 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MTCO2P23-201ENST00000425216 680 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 PUDPP2-201ENST00000431423 643 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MTCO1P45-201ENST00000431457 267 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL138899.2-201ENST00000439139 499 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RRM2P4-201ENST00000441721 562 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RPL31P20-201ENST00000449593 360 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RPS26P41-201ENST00000450370 284 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL096803.1-201ENST00000456921 1021 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL139824.2-201ENST00000458731 1095 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL168P-201ENST00000463821 279 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL216P-201ENST00000471607 298 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL165P-201ENST00000477476 291 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL849P-201ENST00000485236 295 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RN7SKP70-201ENST00000516655 271 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 IGHVII-51-2-201ENST00000519778 259 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC034205.1-201ENST00000520621 638 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AP005639.1-201ENST00000526939 192 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 OR4A6P-201ENST00000534364 970 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC097065.2-201ENST00000608159 533 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AL645927.2-201ENST00000618350 349 ntBASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.16□□□□□ -1.42
AMBRA1Q9C0C7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms