Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC109481.1-201ENST00000509173 282 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 RN7SKP288-201ENST00000516227 268 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 HMGB1P42-201ENST00000532126 553 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 AF230666.2-201ENST00000602328 725 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 AL136531.3-201ENST00000624378 3658 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 MFSD8-218ENST00000641186 4448 ntBASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SHANK3Q9BYB0 RN7SKP273-201ENST00000411392 314 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 RPL23AP27-201ENST00000415161 451 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 PARP4P1-201ENST00000435945 2337 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AL022237.1-201ENST00000446663 358 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AL355032.1-201ENST00000472981 438 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 RPL38P3-201ENST00000484463 213 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC004453.1-201ENST00000487895 408 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 SUMO2P7-201ENST00000511179 285 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC114786.1-201ENST00000512892 1415 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 IGBP1P1-201ENST00000554337 1009 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 TAS2R6P-201ENST00000605022 826 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AL139407.1-201ENST00000613826 1175 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AL359513.1-201ENST00000614364 557 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AL161756.3-201ENST00000641216 2071 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 RNA5SP30-201ENST00000365552 115 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 HNRNPCP1-201ENST00000556181 766 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 GARSP1-201ENST00000570895 719 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 TCL6_3.1-201ENST00000619064 137 ntBASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.66□□□□□ -1.18
SHANK3Q9BYB0 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AC008937.3-201ENST00000606813 1700 ntBASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AL139128.1-201ENST00000413921 941 ntBASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AC100832.1-201ENST00000471945 383 ntBASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 NRBF2P4-201ENST00000520874 850 ntBASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
SHANK3Q9BYB0 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
SHANK3Q9BYB0 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.64□□□□□ -1.19
SHANK3Q9BYB0 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms