Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MTND4P24-201ENST00000424002 397 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 GAPDHP57-201ENST00000424400 585 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 MRPS21P2-201ENST00000424704 264 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 NPM1P26-201ENST00000426339 738 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 PUDPP2-201ENST00000431423 643 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 MED28P4-201ENST00000433137 572 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 PSMD8P1-201ENST00000436275 769 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 BMS1P11-201ENST00000442351 885 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC073476.1-201ENST00000452854 407 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL096803.1-201ENST00000456921 1021 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 BMS1P9-201ENST00000457640 885 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC126615.1-201ENST00000470084 630 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 PPP1R2P6-201ENST00000478565 588 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 RN7SL612P-201ENST00000497704 295 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 SNORA58-201ENST00000505219 137 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 SNX18P23-201ENST00000510867 677 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 RNU6-1102P-201ENST00000516149 96 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 IGHV3-57-201ENST00000520143 280 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 CHEK2P2-201ENST00000554701 672 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL132640.1-201ENST00000559594 619 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL953862.2-201ENST00000603089 820 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC004241.2-201ENST00000614562 444 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AL354718.1-201ENST00000619764 589 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC140479.4-205ENST00000636339 820 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC099654.8-201ENST00000637757 681 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC092070.2-203ENST00000598377 3644 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 AC015799.1-201ENST00000622996 3122 ntBASIC6.03□□□□□ -1.44
SNX18Q96RF0 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
SNX18Q96RF0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
SNX18Q96RF0 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC093671.1-201ENST00000624981 2929 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 HSPD1P1-201ENST00000503199 1726 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 DLEU2L-201ENST00000371086 3555 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 SNORD115-48-201ENST00000364764 76 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 RNU1-55P-201ENST00000365510 158 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 MIR421-201ENST00000365696 85 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 EEF1GP6-201ENST00000402309 905 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 ELOCP3-201ENST00000439303 348 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 OR7E7P-201ENST00000455678 1012 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC108729.2-201ENST00000476543 840 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 RN7SL868P-201ENST00000485915 303 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SNX18Q96RF0 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 RNU6-889P-201ENST00000517189 103 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC131935.1-201ENST00000524621 333 ntBASIC6.02□□□□□ -1.45
SNX18Q96RF0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms