Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC010240.2-201ENST00000445363 1205 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC092421.1-201ENST00000448148 418 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC020633.1-201ENST00000468439 2247 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC005017.1-201ENST00000482002 490 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC023424.1-201ENST00000496058 459 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC008429.4-201ENST00000521201 182 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 RPA2P3-201ENST00000533268 770 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 MIR3189-201ENST00000578735 73 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 RN7SL311P-201ENST00000579858 306 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 MIR6085-201ENST00000618314 110 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC004076.2-201ENST00000620532 3323 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 MIR7159-201ENST00000620587 66 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC127071.2-201ENST00000623293 527 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 AC073488.9-201ENST00000631601 754 ntBASIC4.59□□□□□ -1.67
AP1S3Q96PC3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
AP1S3Q96PC3 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.59□□□□□ -1.68
AP1S3Q96PC3 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
AP1S3Q96PC3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.59□□□□□ -1.68
AP1S3Q96PC3 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.59□□□□□ -1.68
AP1S3Q96PC3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL158827.1-201ENST00000416300 391 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL157884.1-201ENST00000424561 454 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 RPS27AP3-201ENST00000453803 454 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 OSTCP1-201ENST00000455507 450 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 RPL21P42-201ENST00000488408 464 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL035690.1-201ENST00000490892 383 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC105420.1-201ENST00000504389 582 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC010343.2-201ENST00000510162 224 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC093878.1-201ENST00000515630 432 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC126323.4-201ENST00000566935 234 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC011193.2-201ENST00000582638 367 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 GLYATL1P2-202ENST00000588046 902 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC245052.7-201ENST00000601161 359 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL035417.2-201ENST00000603887 796 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC068870.3-201ENST00000625077 2536 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 RPS2P45-201ENST00000469997 2057 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC096921.2-201ENST00000561507 1916 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AL136984.1-201ENST00000607611 1893 ntBASIC4.58□□□□□ -1.68
AP1S3Q96PC3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
AP1S3Q96PC3 AC003985.2-201ENST00000562268 1669 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 AC002525.1-201ENST00000624392 1622 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 LINC01808-203ENST00000641932 1643 ntBASIC4.57□□□□□ -1.68
AP1S3Q96PC3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
AP1S3Q96PC3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms