Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.07□□□□□ -1.28
HPS3Q969F9 MIR212-201ENST00000586026 110 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.07□□□□□ -1.28
HPS3Q969F9 DNAJC19P3-201ENST00000594491 331 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HPS3Q969F9 AL589765.6-201ENST00000601909 549 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC7.07□□□□□ -1.28
HPS3Q969F9 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.07□□□□□ -1.28
HPS3Q969F9 LCOR-201ENST00000286067 4542 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
HPS3Q969F9 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HPS3Q969F9 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.07□□□□□ -1.28
HPS3Q969F9 GUCY1B2-204ENST00000531898 1979 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.07□□□□□ -1.28
HPS3Q969F9 DDX6P1-205ENST00000441966 1436 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 AC092724.1-201ENST00000624623 3397 ntBASIC7.07□□□□□ -1.28
HPS3Q969F9 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.07□□□□□ -1.28
HPS3Q969F9 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HPS3Q969F9 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC7.07□□□□□ -1.28
HPS3Q969F9 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.07□□□□□ -1.28
HPS3Q969F9 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
HPS3Q969F9 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AL592494.2-201ENST00000425455 1548 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
HPS3Q969F9 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 AC107977.1-201ENST00000355745 939 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 GTF3AP1-201ENST00000416942 1004 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 NPM1P23-201ENST00000440193 849 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AL355355.1-201ENST00000442900 793 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 RPL31P20-201ENST00000449593 360 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AP000547.1-201ENST00000454360 617 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 YRDCP3-201ENST00000456507 480 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 RN7SL741P-201ENST00000482473 289 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 OR9A1P-202ENST00000484361 945 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 PCNAP1-201ENST00000505363 709 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AC093524.1-201ENST00000564266 1094 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.06□□□□□ -1.28
HPS3Q969F9 RN7SL66P-201ENST00000582099 264 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 SYPL1P2-201ENST00000582878 727 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC233702.7-202ENST00000582941 211 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 MIR6889-201ENST00000613185 59 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 TCL6_3.1-201ENST00000619064 137 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AC097372.4-201ENST00000625025 466 ntBASIC7.06□□□□□ -1.28
HPS3Q969F9 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
HPS3Q969F9 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
HPS3Q969F9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.06□□□□□ -1.28
HPS3Q969F9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.06□□□□□ -1.28
HPS3Q969F9 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 RN7SKP129-201ENST00000410288 299 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 VN1R31P-201ENST00000417498 730 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 MTND2P15-201ENST00000418575 892 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
HPS3Q969F9 UBE2V1P6-201ENST00000430840 422 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 GTF3AP6-201ENST00000432585 986 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 RPEP4-201ENST00000437636 602 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 RPL12P49-201ENST00000441100 121 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AL158053.1-201ENST00000441503 453 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
HPS3Q969F9 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.05□□□□□ -1.28
HPS3Q969F9 SNX18P26-201ENST00000458433 740 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AC104849.1-201ENST00000462623 405 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.05□□□□□ -1.28
HPS3Q969F9 GM2AP2-201ENST00000491764 562 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 SNRPCP11-201ENST00000492453 205 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 AC114324.2-202ENST00000503812 134 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 RNU6-491P-201ENST00000516099 110 ntBASIC7.05□□□□□ -1.28
HPS3Q969F9 Vault.2-201ENST00000516519 98 ntBASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms