Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RBMY2AP-201ENST00000445405 1157 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 ZNF619P1-201ENST00000446539 752 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 RBMY2CP-201ENST00000448575 1157 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 RBMY2DP-202ENST00000448881 1157 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 RBMY2BP-202ENST00000451071 1156 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC005363.1-201ENST00000530779 351 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC092266.1-201ENST00000610958 165 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 RN7SL261P-201ENST00000613441 282 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 MIR6071-201ENST00000616741 78 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 AC008627.1-201ENST00000517511 1704 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 SAMMSON-210ENST00000641260 1308 ntBASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
C9orf40Q8IXQ3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 OFD1P17-201ENST00000437639 3018 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC093225.1-201ENST00000506867 1408 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC005225.5-201ENST00000623547 2225 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AL662795.2-201ENST00000624252 3706 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 COX6B1P3-201ENST00000312310 260 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 OR7E156P-201ENST00000400303 464 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 SNORA77.2-201ENST00000408571 112 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AL096829.1-201ENST00000413677 457 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC007562.1-201ENST00000421819 517 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC023274.2-201ENST00000445264 521 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 FTLP8-201ENST00000446770 267 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 PPP1R11P1-201ENST00000486095 376 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RBBP4P1-201ENST00000502424 1276 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 PRMT5P1-201ENST00000514351 598 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 OR4A6P-201ENST00000534364 970 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC090115.2-201ENST00000548060 883 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 ADAM3B-201ENST00000569937 840 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AL049840.6-202ENST00000603373 279 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC073488.3-201ENST00000631611 778 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 AC092646.2-201ENST00000431242 2095 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
C9orf40Q8IXQ3 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 RPS15AP30-201ENST00000420976 390 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC069154.1-201ENST00000432914 542 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC079922.1-201ENST00000443291 359 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 DNAJC19P5-201ENST00000443295 316 ntBASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.65□□□□□ -1.5
C9orf40Q8IXQ3 AC068228.1-201ENST00000461723 211 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms