Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AL353898.3-201ENST00000624679 1755 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 SNORD46-201ENST00000364043 104 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 Y_RNA.431-201ENST00000384086 102 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 HMGB3P31-201ENST00000413333 595 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CCNB1IP1P1-201ENST00000428976 839 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC009228.1-203ENST00000430105 432 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 HMGN1P32-201ENST00000441744 256 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GAS5-219ENST00000449289 542 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 EIF4A2P4-201ENST00000458691 1196 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 RPS4XP12-201ENST00000461747 709 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC023794.3-204ENST00000510754 236 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 SNORA31.13-201ENST00000516624 135 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC078950.1-204ENST00000540635 523 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC092747.2-201ENST00000545069 983 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MIR3913-1-201ENST00000577744 102 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MIR4262-201ENST00000578394 54 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MIR3714-201ENST00000579507 65 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 BOLA2P1-201ENST00000584794 232 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC006557.4-201ENST00000585516 830 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MRPS5P4-201ENST00000592830 325 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AL161729.4-201ENST00000604650 476 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 BNIP3P10-201ENST00000605360 577 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC069542.2-201ENST00000624816 216 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 TSHZ2-205ENST00000626626 670 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 MIR3120-201ENST00000636555 81 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 WASF4P-201ENST00000444248 1494 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 ZNF610-207ENST00000601151 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 LUARIS-201ENST00000436105 2916 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 AC008985.1-201ENST00000624169 2239 ntBASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.49□□□□□ -1.05
SCUBE3Q8IX30 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 OR4G11P-202ENST00000642116 1414 ntBASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 RNU4-59P-201ENST00000364447 116 ntBASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 RNU6-621P-201ENST00000364752 109 ntBASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 RNVU1-15-201ENST00000384476 165 ntBASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 OR7E101P-201ENST00000400428 513 ntBASIC8.48□□□□□ -1.05
SCUBE3Q8IX30 AL161787.1-201ENST00000401543 174 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms