Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNA5SP438-201ENST00000516561 112 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 IGLVIV-64-201ENST00000518581 301 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AL049779.3-201ENST00000557141 606 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC090236.2-201ENST00000587933 1101 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC026124.2-201ENST00000621847 656 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC129778.1-202ENST00000623812 261 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AL591379.1-207ENST00000635982 261 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 PSG10P-201ENST00000501199 1500 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RFX7Q2KHR2 AC027279.1-201ENST00000568885 4284 ntBASIC7.38□□□□□ -1.23
RFX7Q2KHR2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 RNU105B-201ENST00000364478 208 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 RN7SKP69-201ENST00000365390 305 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 SNORA17A-201ENST00000391185 133 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 FTLP8-201ENST00000446770 267 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 AL355032.1-201ENST00000472981 438 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 AC022826.1-201ENST00000519383 805 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 FAM72A-208ENST00000607379 1139 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 SNORA17.5-201ENST00000630429 132 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 AC024587.1-201ENST00000505925 2157 ntBASIC7.37□□□□□ -1.23
RFX7Q2KHR2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.37□□□□□ -1.23
RFX7Q2KHR2 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 RNU1-134P-201ENST00000362935 165 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 RNU1-59P-201ENST00000364829 162 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AC245096.1-201ENST00000413104 546 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 TRIM60P16-201ENST00000444048 694 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 RAB28P2-201ENST00000454299 641 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AC020978.7-201ENST00000575953 1187 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 U1.25-201ENST00000614085 162 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AP005431.1-201ENST00000618479 319 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 U1.34-201ENST00000618578 162 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 U1.31-201ENST00000620022 160 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 KARSP1-201ENST00000451871 1752 ntBASIC7.36□□□□□ -1.23
RFX7Q2KHR2 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
RFX7Q2KHR2 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.35□□□□□ -1.23
RFX7Q2KHR2 AC005225.5-201ENST00000623547 2225 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms