Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC010132.2-201ENST00000295493 1043 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
PCDH1Q08174 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 Y_RNA.88-201ENST00000363029 99 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 RNU6-353P-201ENST00000364266 108 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 RNU6-549P-201ENST00000384433 107 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 ATP5F1P4-201ENST00000397288 746 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 RPS3AP24-201ENST00000407896 734 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 SNORA2C-201ENST00000408564 137 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC007790.1-201ENST00000439081 782 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC009263.1-201ENST00000441193 1239 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 HMGB1P5-202ENST00000451497 985 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 RPS20P4-201ENST00000461659 355 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 GLRXP3-201ENST00000470810 321 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC116353.2-201ENST00000505332 712 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC095059.2-201ENST00000510601 933 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AP001124.1-201ENST00000529628 385 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC126755.2-209ENST00000531453 699 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC069360.1-202ENST00000533941 557 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC138969.1-212ENST00000541593 699 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 NPIPA5-203ENST00000543801 699 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 EEF1B2P4-201ENST00000551398 348 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 BMS1P15-201ENST00000554269 1141 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 DNM1P31-201ENST00000564149 696 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC079171.1-201ENST00000568788 914 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC7.24□□□□□ -1.25
PCDH1Q08174 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC7.24□□□□□ -1.25
PCDH1Q08174 MTCO2P22-201ENST00000603246 681 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 AL669830.1-201ENST00000621457 656 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 AC095031.1-201ENST00000623685 672 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 AC016582.3-206ENST00000636547 207 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC7.24□□□□□ -1.25
PCDH1Q08174 TTC39DP-201ENST00000416781 1688 ntBASIC7.24□□□□□ -1.25
PCDH1Q08174 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PCDH1Q08174 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PCDH1Q08174 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 AL137100.1-201ENST00000556703 1620 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 TMEM75-201ENST00000624314 2165 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 EEF1A1P5-201ENST00000436459 1389 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 IFNA7-201ENST00000239347 737 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDH1Q08174 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
PCDH1Q08174 IL17F-201ENST00000336123 850 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 OR11H13P-201ENST00000359695 979 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 Y_RNA.248-201ENST00000364501 109 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.23□□□□□ -1.25
PCDH1Q08174 RNA5SP18-201ENST00000390935 121 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AC092952.1-201ENST00000397646 1209 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 OR4F7P-201ENST00000402444 931 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 OR4F1P-201ENST00000405102 938 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PCDH1Q08174 AC007899.1-201ENST00000412776 775 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.23□□□□□ -1.25
PCDH1Q08174 DNAJA1P2-201ENST00000421360 1197 ntBASIC7.23□□□□□ -1.25
PCDH1Q08174 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.23□□□□□ -1.25
PCDH1Q08174 OR4F2P-201ENST00000424047 938 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms