Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL136100.1-201ENST00000407696 330 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC006509.1-201ENST00000420788 634 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 AL589794.1-201ENST00000424971 390 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 TRBV29OR9-2-201ENST00000427589 333 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AL121916.1-201ENST00000429405 308 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.51□□□□□ -1.21
SOX4Q06945 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC129850.1-201ENST00000436203 508 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AL354714.5-201ENST00000450131 590 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 RN7SKP198-201ENST00000459286 306 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 RPL7P16-201ENST00000479738 738 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AC004815.1-201ENST00000484185 331 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AC096743.1-201ENST00000485172 319 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX4Q06945 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC026414.1-201ENST00000504046 698 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 MTCYBP44-201ENST00000514835 823 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 RNU6-232P-201ENST00000517144 64 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 AP000619.2-201ENST00000546014 969 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX4Q06945 MTND4LP24-201ENST00000572277 291 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.51□□□□□ -1.21
SOX4Q06945 AC073114.1-201ENST00000612027 490 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 AP005212.3-201ENST00000619964 528 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 AL356266.1-201ENST00000623311 483 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX4Q06945 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC7.51□□□□□ -1.21
SOX4Q06945 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 AL359263.1-201ENST00000441188 2796 ntBASIC7.51□□□□□ -1.21
SOX4Q06945 MELK-207ENST00000536860 2342 ntTSL 2 BASIC7.51□□□□□ -1.21
SOX4Q06945 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SOX4Q06945 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX4Q06945 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 Y_RNA.3-201ENST00000362331 103 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 RNU5B-1-201ENST00000363286 116 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SOX4Q06945 RNU6-83P-201ENST00000384568 112 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX4Q06945 LDHAP5-201ENST00000394996 622 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 HMGN1P6-201ENST00000438508 291 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 PA2G4P1-201ENST00000442248 1197 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX4Q06945 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 OTX2P1-201ENST00000450956 354 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 SYPL1P1-201ENST00000473622 768 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 RN7SL259P-201ENST00000478499 253 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 RN7SL379P-201ENST00000479912 293 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 AC074386.1-206ENST00000487102 761 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 AC024451.1-201ENST00000508013 779 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX4Q06945 AC093770.1-201ENST00000511559 571 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 RNU6-759P-201ENST00000516740 103 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 IGLC4-201ENST00000517690 248 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX4Q06945 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SOX4Q06945 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX4Q06945 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX4Q06945 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC7.5□□□□□ -1.21
SOX4Q06945 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.5□□□□□ -1.21
SOX4Q06945 AC015802.2-201ENST00000589690 189 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 5S_rRNA.23-201ENST00000612086 102 ntBASIC7.5□□□□□ -1.21
SOX4Q06945 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.5□□□□□ -1.21
SOX4Q06945 HTR1DP1-201ENST00000616500 888 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms