Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HIST1H1AQ02539 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 CCNT2P1-201ENST00000423082 1315 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 PROS2P-201ENST00000474651 1951 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC005702.3-201ENST00000585345 1447 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC093849.1-201ENST00000563631 2209 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 OR7A2P-201ENST00000304105 930 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RNU1-5P-201ENST00000362684 144 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RNA5-8SP5-201ENST00000365304 152 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RNU11-6P-201ENST00000391127 133 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RPL12P23-201ENST00000405880 490 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RN7SKP129-201ENST00000410288 299 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RN7SKP221-201ENST00000410420 301 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 MEAF6P1-201ENST00000416092 327 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL139184.1-202ENST00000422303 222 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AP003385.1-201ENST00000426387 893 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC016027.5-201ENST00000427227 210 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 OR9A1P-202ENST00000484361 945 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RN7SL655P-201ENST00000486087 298 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 RN7SL714P-201ENST00000487050 298 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC093325.1-201ENST00000508378 326 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 MINOS1P4-201ENST00000515470 318 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AP004607.5-201ENST00000532034 217 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC026956.1-201ENST00000558741 396 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 Z95327.3-201ENST00000610385 572 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 CLUHP10-201ENST00000631979 980 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC073869.7-201ENST00000640874 297 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC022325.1-201ENST00000502748 2199 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 AC239868.2-201ENST00000564237 4527 ntBASIC4.75□□□□□ -1.65
HIST1H1AQ02539 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HIST1H1AQ02539 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HIST1H1AQ02539 AC010894.1-201ENST00000313760 361 ntBASIC4.74□□□□□ -1.65
HIST1H1AQ02539 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms