Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 AL606537.1-201ENST00000607258 2011 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 VTRNA3-1P-201ENST00000362552 102 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 RNA5SP478-201ENST00000364657 115 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 HMGA1P8-201ENST00000414130 321 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 AL929472.1-201ENST00000417484 429 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 RPS10P21-201ENST00000430654 475 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 RPS13P2-201ENST00000437890 455 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 OR7E7P-201ENST00000455678 1012 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 RN7SL91P-201ENST00000469313 291 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 RN7SL223P-201ENST00000470401 294 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 AP006437.1-202ENST00000530327 933 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 AL132640.2-202ENST00000559732 614 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 ANP32BP1-202ENST00000568553 737 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC4.36□□□□□ -1.71
CKS1BP61024 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 AC021506.1-201ENST00000581971 597 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 PRR13P3-201ENST00000603578 376 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 AC024589.2-201ENST00000605642 1294 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 PTCHD3P1-201ENST00000612350 537 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 MIR7854-201ENST00000620068 65 ntBASIC4.36□□□□□ -1.71
CKS1BP61024 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CKS1BP61024 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.36□□□□□ -1.71
CKS1BP61024 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.36□□□□□ -1.71
CKS1BP61024 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CKS1BP61024 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 USP9YP3-201ENST00000434481 1766 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 NAMPTP1-201ENST00000440465 2514 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC093775.1-201ENST00000624154 1868 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CKS1BP61024 MIR137-201ENST00000385223 102 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 SNX18P13-201ENST00000412442 529 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CKS1BP61024 AC092447.2-201ENST00000435487 669 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC027124.1-201ENST00000440852 466 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC093581.1-204ENST00000442606 390 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.35□□□□□ -1.71
CKS1BP61024 RPL7L1P1-201ENST00000448259 785 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 AC016822.1-201ENST00000457975 439 ntTSL 3 BASIC4.35□□□□□ -1.71
CKS1BP61024 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 COX6B1P2-201ENST00000489624 230 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AC022206.1-201ENST00000495947 347 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 SCG5-207ENST00000497208 949 ntTSL 5 BASIC4.35□□□□□ -1.71
CKS1BP61024 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CKS1BP61024 USP9YP2-201ENST00000504503 1000 ntBASIC4.35□□□□□ -1.71
CKS1BP61024 AL390198.2-201ENST00000510553 222 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms