Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC008171.1-201ENST00000395058 200 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AL136116.2-201ENST00000404020 785 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 PRUNEP1-201ENST00000425846 705 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AL590399.4-201ENST00000436561 601 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 PPIAP10-201ENST00000438675 458 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC002553.3-201ENST00000453002 341 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC084754.1-201ENST00000463466 464 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC098799.1-201ENST00000504752 800 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC010343.2-201ENST00000510162 224 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.47□□□□□ -1.21
RHBDL3P58872 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AP002981.1-201ENST00000517692 975 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC7.47□□□□□ -1.21
RHBDL3P58872 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC097467.4-201ENST00000605504 141 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AL118556.2-201ENST00000614375 824 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AL096712.1-201ENST00000614561 159 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 RFPL4AP6-201ENST00000616792 846 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 OXSM-209ENST00000626005 309 ntTSL 3 BASIC7.47□□□□□ -1.21
RHBDL3P58872 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 AC025809.2-201ENST00000625085 1802 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 AC105749.1-201ENST00000631338 2008 ntBASIC7.47□□□□□ -1.21
RHBDL3P58872 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.47□□□□□ -1.21
RHBDL3P58872 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RHBDL3P58872 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.47□□□□□ -1.21
RHBDL3P58872 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RHBDL3P58872 FO082842.1-201ENST00000423552 1370 ntBASIC7.46□□□□□ -1.21
RHBDL3P58872 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RHBDL3P58872 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.46□□□□□ -1.21
RHBDL3P58872 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
RHBDL3P58872 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
RHBDL3P58872 GUCY1B2-204ENST00000531898 1979 ntBASIC7.46□□□□□ -1.21
RHBDL3P58872 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.46□□□□□ -1.21
RHBDL3P58872 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.21
RHBDL3P58872 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RHBDL3P58872 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.46□□□□□ -1.22
RHBDL3P58872 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RHBDL3P58872 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC7.46□□□□□ -1.22
RHBDL3P58872 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 ATP5LP2-201ENST00000440646 311 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.46□□□□□ -1.22
RHBDL3P58872 CST12P-201ENST00000457644 362 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.46□□□□□ -1.22
RHBDL3P58872 OR9N1P-201ENST00000491296 333 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.46□□□□□ -1.22
RHBDL3P58872 UGT2A3P7-201ENST00000510485 734 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 SEC11B-201ENST00000518383 499 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.46□□□□□ -1.22
RHBDL3P58872 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.46□□□□□ -1.22
RHBDL3P58872 RPL12P48-201ENST00000605620 304 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 SNX18P12-201ENST00000624821 759 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC245100.2-201ENST00000454544 1679 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 NCOA4P3-201ENST00000513203 1877 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
RHBDL3P58872 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 AL133243.4-201ENST00000623116 3109 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC008627.1-201ENST00000517511 1704 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 MAPK10-365ENST00000641902 3825 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.46□□□□□ -1.22
RHBDL3P58872 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RHBDL3P58872 AC016251.2-201ENST00000623393 3089 ntBASIC7.46□□□□□ -1.22
RHBDL3P58872 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RHBDL3P58872 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.45□□□□□ -1.22
RHBDL3P58872 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.45□□□□□ -1.22
RHBDL3P58872 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms