Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.48□□□□□ -1.05
MSH6P52701 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
MSH6P52701 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
MSH6P52701 RNA5SP507-201ENST00000363603 121 ntBASIC8.48□□□□□ -1.05
MSH6P52701 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC8.48□□□□□ -1.05
MSH6P52701 AL096829.1-201ENST00000413677 457 ntBASIC8.48□□□□□ -1.05
MSH6P52701 RPL12P3-201ENST00000440080 396 ntBASIC8.48□□□□□ -1.05
MSH6P52701 AC016027.4-201ENST00000450866 277 ntBASIC8.48□□□□□ -1.05
MSH6P52701 RPS23P6-201ENST00000466136 431 ntBASIC8.48□□□□□ -1.05
MSH6P52701 OR2AO1P-201ENST00000476497 403 ntBASIC8.48□□□□□ -1.05
MSH6P52701 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.48□□□□□ -1.05
MSH6P52701 IGLV3-6-201ENST00000523937 250 ntBASIC8.48□□□□□ -1.05
MSH6P52701 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.48□□□□□ -1.05
MSH6P52701 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC8.48□□□□□ -1.05
MSH6P52701 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
MSH6P52701 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
MSH6P52701 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
MSH6P52701 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.48□□□□□ -1.05
MSH6P52701 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
MSH6P52701 AC087565.3-203ENST00000641018 837 ntBASIC8.48□□□□□ -1.05
MSH6P52701 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC8.48□□□□□ -1.05
MSH6P52701 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
MSH6P52701 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
MSH6P52701 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.47□□□□□ -1.05
MSH6P52701 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
MSH6P52701 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC8.47□□□□□ -1.05
MSH6P52701 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.47□□□□□ -1.05
MSH6P52701 ING3-204ENST00000431467 1447 ntTSL 2 BASIC8.47□□□□□ -1.05
MSH6P52701 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
MSH6P52701 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
MSH6P52701 AC092725.2-201ENST00000567658 1389 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC105114.1-201ENST00000624795 1862 ntBASIC8.47□□□□□ -1.05
MSH6P52701 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
MSH6P52701 RN7SKP128-201ENST00000364270 303 ntBASIC8.47□□□□□ -1.05
MSH6P52701 MIR640-201ENST00000385086 96 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AL445238.1-204ENST00000400311 463 ntBASIC8.47□□□□□ -1.05
MSH6P52701 NME1P1-201ENST00000420914 382 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC8.47□□□□□ -1.05
MSH6P52701 CYCSP51-201ENST00000443545 318 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC073850.1-201ENST00000449243 255 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC023245.1-201ENST00000468501 517 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.47□□□□□ -1.05
MSH6P52701 HIGD1AP14-201ENST00000507617 282 ntBASIC8.47□□□□□ -1.05
MSH6P52701 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.47□□□□□ -1.05
MSH6P52701 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC8.47□□□□□ -1.05
MSH6P52701 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC8.47□□□□□ -1.05
MSH6P52701 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC8.47□□□□□ -1.05
MSH6P52701 AC073342.3-201ENST00000624211 193 ntBASIC8.47□□□□□ -1.05
MSH6P52701 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.47□□□□□ -1.05
MSH6P52701 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.47□□□□□ -1.05
MSH6P52701 Z82209.2-201ENST00000623410 2012 ntBASIC8.47□□□□□ -1.05
MSH6P52701 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
MSH6P52701 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
MSH6P52701 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 AC089998.1-201ENST00000548575 3141 ntBASIC8.46□□□□□ -1.05
MSH6P52701 AL355377.1-201ENST00000621125 1653 ntBASIC8.46□□□□□ -1.05
MSH6P52701 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 AC119674.1-202ENST00000641333 1860 ntBASIC8.46□□□□□ -1.05
MSH6P52701 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
MSH6P52701 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 AC010624.4-201ENST00000597606 1351 ntBASIC8.46□□□□□ -1.06
MSH6P52701 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC8.46□□□□□ -1.06
MSH6P52701 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 AL713922.1-201ENST00000416477 747 ntBASIC8.46□□□□□ -1.06
MSH6P52701 TNPO1P1-201ENST00000423641 1138 ntBASIC8.46□□□□□ -1.06
MSH6P52701 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 RN7SL72P-201ENST00000460697 269 ntBASIC8.46□□□□□ -1.06
MSH6P52701 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC8.46□□□□□ -1.06
MSH6P52701 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.46□□□□□ -1.06
MSH6P52701 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC8.46□□□□□ -1.06
MSH6P52701 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC8.46□□□□□ -1.06
MSH6P52701 FKBP1AP1-201ENST00000594588 318 ntBASIC8.46□□□□□ -1.06
MSH6P52701 AC013731.1-201ENST00000604340 883 ntBASIC8.46□□□□□ -1.06
MSH6P52701 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.46□□□□□ -1.06
MSH6P52701 AL021918.2-201ENST00000613415 194 ntBASIC8.46□□□□□ -1.06
MSH6P52701 AC096861.1-201ENST00000616652 240 ntBASIC8.46□□□□□ -1.06
MSH6P52701 AC068870.2-201ENST00000620635 389 ntBASIC8.46□□□□□ -1.06
MSH6P52701 AL132640.3-201ENST00000630473 177 ntBASIC8.46□□□□□ -1.06
MSH6P52701 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 AL592429.1-201ENST00000403909 1473 ntBASIC8.46□□□□□ -1.06
MSH6P52701 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
MSH6P52701 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
MSH6P52701 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
MSH6P52701 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
MSH6P52701 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
MSH6P52701 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.45□□□□□ -1.06
MSH6P52701 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
MSH6P52701 AC127024.8-201ENST00000623719 2094 ntBASIC8.45□□□□□ -1.06
MSH6P52701 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms