Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN9P43378 TRAV35-201ENST00000390462 330 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.49□□□□□ -1.37
PTPN9P43378 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC099782.1-201ENST00000425889 474 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 NPM1P48-201ENST00000436002 853 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 GAPDHP23-201ENST00000444823 993 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 RAD1P2-201ENST00000446414 663 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.49□□□□□ -1.37
PTPN9P43378 RN7SL552P-201ENST00000462094 276 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 MARK2P8-201ENST00000476069 952 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC098818.1-201ENST00000478593 252 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 AC095052.1-201ENST00000509955 863 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.49□□□□□ -1.37
PTPN9P43378 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 AC104820.1-201ENST00000624183 307 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 OR7A1P-202ENST00000641542 1158 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN9P43378 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN9P43378 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PTPN9P43378 AC024651.2-201ENST00000562480 2098 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 AC137056.2-201ENST00000624055 1958 ntBASIC6.49□□□□□ -1.37
PTPN9P43378 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.49□□□□□ -1.37
PTPN9P43378 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN9P43378 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.49□□□□□ -1.37
PTPN9P43378 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN9P43378 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTPN9P43378 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 RNF19BPY-201ENST00000458209 1550 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 AL359091.1-201ENST00000449048 1734 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
PTPN9P43378 AL451142.1-201ENST00000375867 775 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AL136116.2-201ENST00000404020 785 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN9P43378 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN9P43378 BMP6P1-201ENST00000431230 679 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC013403.1-201ENST00000436954 263 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC010086.1-201ENST00000437359 1052 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 XKRYP6-201ENST00000440468 1116 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AL645936.1-201ENST00000441979 518 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 XKRYP3-201ENST00000442113 1116 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 HMGN1P8-201ENST00000463578 288 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 OR7E22P-201ENST00000478335 1035 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 RPL29P23-201ENST00000486188 442 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 RN7SL568P-201ENST00000493069 298 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 ZNF519P4-201ENST00000514008 125 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.48□□□□□ -1.37
PTPN9P43378 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 AC009303.3-201ENST00000591103 736 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC011500.1-201ENST00000601963 469 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC092944.2-201ENST00000605443 889 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 AL137067.2-201ENST00000621202 131 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 AC103798.2-201ENST00000624292 632 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN9P43378 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.48□□□□□ -1.37
PTPN9P43378 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 AL662795.2-201ENST00000624252 3706 ntBASIC6.48□□□□□ -1.37
PTPN9P43378 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTPN9P43378 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTPN9P43378 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.48□□□□□ -1.37
PTPN9P43378 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PTPN9P43378 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.47□□□□□ -1.37
PTPN9P43378 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
PTPN9P43378 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
PTPN9P43378 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms