Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNA5SP400-201ENST00000517155 111 ntBASIC6.66□□□□□ -1.34
SSR1P43307 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.66□□□□□ -1.34
SSR1P43307 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.66□□□□□ -1.34
SSR1P43307 RPL3P13-201ENST00000550415 216 ntBASIC6.66□□□□□ -1.34
SSR1P43307 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.66□□□□□ -1.34
SSR1P43307 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.66□□□□□ -1.34
SSR1P43307 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.66□□□□□ -1.34
SSR1P43307 AC073046.2-201ENST00000604756 527 ntBASIC6.66□□□□□ -1.34
SSR1P43307 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.66□□□□□ -1.34
SSR1P43307 MIR6883-201ENST00000614952 78 ntBASIC6.66□□□□□ -1.34
SSR1P43307 AL122125.1-201ENST00000616999 600 ntBASIC6.66□□□□□ -1.34
SSR1P43307 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.66□□□□□ -1.34
SSR1P43307 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 AL353743.3-201ENST00000442109 1468 ntBASIC6.66□□□□□ -1.34
SSR1P43307 GUCY1B2-204ENST00000531898 1979 ntBASIC6.66□□□□□ -1.34
SSR1P43307 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SSR1P43307 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSR1P43307 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.34
SSR1P43307 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSR1P43307 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
SSR1P43307 AL033519.1-201ENST00000407266 307 ntBASIC6.65□□□□□ -1.34
SSR1P43307 RN7SKP161-201ENST00000411110 305 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 MED28P4-201ENST00000433137 572 ntBASIC6.65□□□□□ -1.34
SSR1P43307 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 OR13K1P-201ENST00000444577 975 ntBASIC6.65□□□□□ -1.34
SSR1P43307 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.65□□□□□ -1.34
SSR1P43307 PPIAP32-201ENST00000449940 472 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AL034369.1-201ENST00000453808 477 ntBASIC6.65□□□□□ -1.34
SSR1P43307 RPL31P11-202ENST00000454082 372 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AC103563.5-201ENST00000455643 364 ntBASIC6.65□□□□□ -1.34
SSR1P43307 RN7SL714P-201ENST00000487050 298 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AC090058.1-201ENST00000498788 435 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSR1P43307 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSR1P43307 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.65□□□□□ -1.34
SSR1P43307 NIFKP4-201ENST00000567275 1192 ntBASIC6.65□□□□□ -1.34
SSR1P43307 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC6.65□□□□□ -1.34
SSR1P43307 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.65□□□□□ -1.34
SSR1P43307 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.65□□□□□ -1.34
SSR1P43307 RNU6-84P-201ENST00000607737 102 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AL589743.6-201ENST00000611025 117 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AL445649.1-201ENST00000615941 691 ntBASIC6.65□□□□□ -1.34
SSR1P43307 AC022726.2-201ENST00000634673 547 ntBASIC6.65□□□□□ -1.34
SSR1P43307 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
SSR1P43307 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.65□□□□□ -1.35
SSR1P43307 SAMM50P1-201ENST00000455403 1399 ntBASIC6.65□□□□□ -1.35
SSR1P43307 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
SSR1P43307 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
SSR1P43307 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
SSR1P43307 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
SSR1P43307 RPL31P11-201ENST00000426558 1558 ntBASIC6.65□□□□□ -1.35
SSR1P43307 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.65□□□□□ -1.35
SSR1P43307 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
SSR1P43307 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSR1P43307 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC6.64□□□□□ -1.35
SSR1P43307 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SSR1P43307 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
SSR1P43307 LCN1P2-201ENST00000372030 223 ntBASIC6.64□□□□□ -1.35
SSR1P43307 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 MIR433-201ENST00000384837 93 ntBASIC6.64□□□□□ -1.35
SSR1P43307 AL360271.1-201ENST00000395679 510 ntBASIC6.64□□□□□ -1.35
SSR1P43307 MORN2-202ENST00000409077 465 ntTSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 AC083862.1-201ENST00000427378 1242 ntBASIC6.64□□□□□ -1.35
SSR1P43307 AC234771.4-201ENST00000441416 730 ntBASIC6.64□□□□□ -1.35
SSR1P43307 AC063955.1-201ENST00000462872 685 ntBASIC6.64□□□□□ -1.35
SSR1P43307 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 RN7SL221P-201ENST00000466190 281 ntBASIC6.64□□□□□ -1.35
SSR1P43307 MARK2P8-201ENST00000476069 952 ntBASIC6.64□□□□□ -1.35
SSR1P43307 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.64□□□□□ -1.35
SSR1P43307 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.64□□□□□ -1.35
SSR1P43307 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC6.64□□□□□ -1.35
SSR1P43307 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms