Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.74□□□□□ -1.49
RFC3P40938 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 AC009963.3-201ENST00000458090 486 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AC068228.1-201ENST00000461723 211 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 IGHV4-55-201ENST00000520889 368 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AC036111.2-201ENST00000533247 901 ntBASIC5.74□□□□□ -1.49
RFC3P40938 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.74□□□□□ -1.49
RFC3P40938 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.74□□□□□ -1.49
RFC3P40938 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.74□□□□□ -1.49
RFC3P40938 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.74□□□□□ -1.49
RFC3P40938 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.74□□□□□ -1.49
RFC3P40938 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.74□□□□□ -1.49
RFC3P40938 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.74□□□□□ -1.49
RFC3P40938 AL008723.3-201ENST00000608926 449 ntBASIC5.74□□□□□ -1.49
RFC3P40938 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 AL080312.2-201ENST00000613001 630 ntBASIC5.74□□□□□ -1.49
RFC3P40938 AC022400.9-201ENST00000623633 273 ntBASIC5.74□□□□□ -1.49
RFC3P40938 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 XKRY2-202ENST00000623874 1581 ntBASIC5.74□□□□□ -1.49
RFC3P40938 XKRY-202ENST00000624960 1581 ntBASIC5.74□□□□□ -1.49
RFC3P40938 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 HSPD1P8-201ENST00000400121 1658 ntBASIC5.74□□□□□ -1.49
RFC3P40938 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.74□□□□□ -1.49
RFC3P40938 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.74□□□□□ -1.49
RFC3P40938 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFC3P40938 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 AL354854.1-201ENST00000455940 1363 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFC3P40938 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFC3P40938 RN7SKP186-201ENST00000365371 303 ntBASIC5.73□□□□□ -1.49
RFC3P40938 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFC3P40938 AP003170.5-201ENST00000397185 335 ntBASIC5.73□□□□□ -1.49
RFC3P40938 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.73□□□□□ -1.49
RFC3P40938 RN7SKP144-201ENST00000411108 279 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AL713922.1-201ENST00000416477 747 ntBASIC5.73□□□□□ -1.49
RFC3P40938 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 AC021876.1-201ENST00000425959 359 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 AL389925.1-201ENST00000432257 728 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AL590004.3-202ENST00000445883 451 ntBASIC5.73□□□□□ -1.49
RFC3P40938 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.73□□□□□ -1.49
RFC3P40938 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.73□□□□□ -1.49
RFC3P40938 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.73□□□□□ -1.49
RFC3P40938 AC098847.1-201ENST00000473094 348 ntBASIC5.73□□□□□ -1.49
RFC3P40938 RPL34P33-201ENST00000486062 334 ntBASIC5.73□□□□□ -1.49
RFC3P40938 RN7SKP238-201ENST00000516483 249 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.73□□□□□ -1.49
RFC3P40938 AP000662.1-201ENST00000530952 487 ntBASIC5.73□□□□□ -1.49
RFC3P40938 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 CYCSP38-201ENST00000559840 322 ntBASIC5.73□□□□□ -1.49
RFC3P40938 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 AC091193.1-201ENST00000604640 448 ntBASIC5.73□□□□□ -1.49
RFC3P40938 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.73□□□□□ -1.49
RFC3P40938 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RFC3P40938 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFC3P40938 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFC3P40938 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.73□□□□□ -1.49
RFC3P40938 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RFC3P40938 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.72□□□□□ -1.49
RFC3P40938 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RFC3P40938 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.72□□□□□ -1.49
RFC3P40938 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms