Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RPA3P35244 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.14□□□□□ -1.43
RPA3P35244 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01613-201ENST00000561476 2780 ntBASIC6.13□□□□□ -1.43
RPA3P35244 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RPA3P35244 DHFRP2-201ENST00000414224 547 ntBASIC6.13□□□□□ -1.43
RPA3P35244 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 CXCR2P1-202ENST00000443392 1074 ntBASIC6.13□□□□□ -1.43
RPA3P35244 POU5F1P5-201ENST00000445059 658 ntBASIC6.13□□□□□ -1.43
RPA3P35244 AL162739.1-201ENST00000450606 307 ntBASIC6.13□□□□□ -1.43
RPA3P35244 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.13□□□□□ -1.43
RPA3P35244 RPS27P20-201ENST00000492051 246 ntBASIC6.13□□□□□ -1.43
RPA3P35244 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 SNORA74.1-201ENST00000516320 180 ntBASIC6.13□□□□□ -1.43
RPA3P35244 AC136777.2-201ENST00000522979 358 ntBASIC6.13□□□□□ -1.43
RPA3P35244 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC6.13□□□□□ -1.43
RPA3P35244 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 DYNLL1P1-201ENST00000595442 269 ntBASIC6.13□□□□□ -1.43
RPA3P35244 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.13□□□□□ -1.43
RPA3P35244 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.13□□□□□ -1.43
RPA3P35244 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.13□□□□□ -1.43
RPA3P35244 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 AC123769.1-201ENST00000530992 3192 ntBASIC6.13□□□□□ -1.43
RPA3P35244 CASC19-246ENST00000641625 1606 ntBASIC6.13□□□□□ -1.43
RPA3P35244 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.13□□□□□ -1.43
RPA3P35244 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RPA3P35244 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
RPA3P35244 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.12□□□□□ -1.43
RPA3P35244 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.12□□□□□ -1.43
RPA3P35244 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.12□□□□□ -1.43
RPA3P35244 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RPA3P35244 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RPA3P35244 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 RPS7P14-201ENST00000426405 583 ntBASIC6.12□□□□□ -1.43
RPA3P35244 AC013403.1-201ENST00000436954 263 ntBASIC6.12□□□□□ -1.43
RPA3P35244 OFD1P17-201ENST00000437639 3018 ntBASIC6.12□□□□□ -1.43
RPA3P35244 ARMC4P1-201ENST00000438905 707 ntBASIC6.12□□□□□ -1.43
RPA3P35244 GAPDHP23-201ENST00000444823 993 ntBASIC6.12□□□□□ -1.43
RPA3P35244 AC097359.1-201ENST00000447946 463 ntBASIC6.12□□□□□ -1.43
RPA3P35244 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC6.12□□□□□ -1.43
RPA3P35244 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
RPA3P35244 RARRES2P3-201ENST00000457739 473 ntBASIC6.12□□□□□ -1.43
RPA3P35244 RN7SL352P-201ENST00000466002 277 ntBASIC6.12□□□□□ -1.43
RPA3P35244 H3F3AP5-201ENST00000475267 429 ntBASIC6.12□□□□□ -1.43
RPA3P35244 AC005017.1-201ENST00000482002 490 ntBASIC6.12□□□□□ -1.43
RPA3P35244 RN7SL284P-201ENST00000498823 275 ntBASIC6.12□□□□□ -1.43
RPA3P35244 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.12□□□□□ -1.43
RPA3P35244 AC116917.1-201ENST00000520558 305 ntBASIC6.12□□□□□ -1.43
RPA3P35244 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.12□□□□□ -1.43
RPA3P35244 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.12□□□□□ -1.43
RPA3P35244 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.12□□□□□ -1.43
RPA3P35244 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AC138207.8-204ENST00000579588 527 ntBASIC6.12□□□□□ -1.43
RPA3P35244 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 WBP1LP12-201ENST00000604449 331 ntBASIC6.12□□□□□ -1.43
RPA3P35244 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 AC010325.3-201ENST00000641084 394 ntBASIC6.12□□□□□ -1.43
RPA3P35244 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RPA3P35244 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.12□□□□□ -1.43
RPA3P35244 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms