Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC004836.1-201ENST00000623032 634 ntBASIC6.97□□□□□ -1.29
CIITAP33076 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.97□□□□□ -1.29
CIITAP33076 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
CIITAP33076 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 AP000641.1-201ENST00000531988 1639 ntBASIC6.97□□□□□ -1.29
CIITAP33076 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.97□□□□□ -1.29
CIITAP33076 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
CIITAP33076 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CIITAP33076 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CIITAP33076 RBMY1HP-201ENST00000382759 1389 ntBASIC6.96□□□□□ -1.29
CIITAP33076 AL049634.1-201ENST00000453770 1720 ntBASIC6.96□□□□□ -1.29
CIITAP33076 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CIITAP33076 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CIITAP33076 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.96□□□□□ -1.29
CIITAP33076 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CIITAP33076 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.96□□□□□ -1.3
CIITAP33076 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CIITAP33076 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CIITAP33076 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CIITAP33076 RNA5SP156-201ENST00000410250 110 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.96□□□□□ -1.3
CIITAP33076 AC007562.1-201ENST00000421819 517 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AC007568.1-201ENST00000422912 471 ntBASIC6.96□□□□□ -1.3
CIITAP33076 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.96□□□□□ -1.3
CIITAP33076 AL353662.1-201ENST00000439099 327 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AC023274.2-201ENST00000445264 521 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AP002884.1-201ENST00000479691 655 ntBASIC6.96□□□□□ -1.3
CIITAP33076 MTND2P31-201ENST00000512602 616 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.96□□□□□ -1.3
CIITAP33076 PRMT5P1-201ENST00000514351 598 ntBASIC6.96□□□□□ -1.3
CIITAP33076 SNORA48.9-201ENST00000516419 162 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC6.96□□□□□ -1.3
CIITAP33076 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.96□□□□□ -1.3
CIITAP33076 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.96□□□□□ -1.3
CIITAP33076 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CIITAP33076 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.96□□□□□ -1.3
CIITAP33076 RNU4ATAC-201ENST00000580972 127 ntBASIC6.96□□□□□ -1.3
CIITAP33076 PRELID3BP3-201ENST00000584963 545 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 RFPL4AP6-201ENST00000616792 846 ntBASIC6.96□□□□□ -1.3
CIITAP33076 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 AC073488.3-201ENST00000631611 778 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AC116667.2-201ENST00000641075 823 ntBASIC6.96□□□□□ -1.3
CIITAP33076 AL353763.1-201ENST00000624467 1628 ntBASIC6.96□□□□□ -1.3
CIITAP33076 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.96□□□□□ -1.3
CIITAP33076 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.96□□□□□ -1.3
CIITAP33076 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 AC011504.1-201ENST00000623331 4103 ntBASIC6.95□□□□□ -1.3
CIITAP33076 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.95□□□□□ -1.3
CIITAP33076 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CIITAP33076 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 MAPK10-270ENST00000641102 3538 ntBASIC6.95□□□□□ -1.3
CIITAP33076 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.95□□□□□ -1.3
CIITAP33076 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 COX6B1P3-201ENST00000312310 260 ntBASIC6.95□□□□□ -1.3
CIITAP33076 RNU1-134P-201ENST00000362935 165 ntBASIC6.95□□□□□ -1.3
CIITAP33076 MIR130B-202ENST00000385018 82 ntBASIC6.95□□□□□ -1.3
CIITAP33076 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CIITAP33076 TMA16P2-201ENST00000413187 601 ntBASIC6.95□□□□□ -1.3
CIITAP33076 RPS21P8-201ENST00000413365 247 ntBASIC6.95□□□□□ -1.3
CIITAP33076 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.95□□□□□ -1.3
CIITAP33076 AC069154.1-201ENST00000432914 542 ntBASIC6.95□□□□□ -1.3
CIITAP33076 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CIITAP33076 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 TRIM60P16-201ENST00000444048 694 ntBASIC6.95□□□□□ -1.3
CIITAP33076 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AL022319.1-201ENST00000458183 1167 ntBASIC6.95□□□□□ -1.3
CIITAP33076 LSM3P4-201ENST00000502948 309 ntBASIC6.95□□□□□ -1.3
CIITAP33076 AL158068.1-201ENST00000506116 616 ntBASIC6.95□□□□□ -1.3
CIITAP33076 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.95□□□□□ -1.3
CIITAP33076 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 RNU6-964P-201ENST00000516524 69 ntBASIC6.95□□□□□ -1.3
CIITAP33076 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.95□□□□□ -1.3
CIITAP33076 TOMM20P1-201ENST00000534518 427 ntBASIC6.95□□□□□ -1.3
CIITAP33076 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AC020916.2-201ENST00000591242 360 ntBASIC6.95□□□□□ -1.3
CIITAP33076 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.95□□□□□ -1.3
CIITAP33076 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CIITAP33076 AC096861.1-201ENST00000616652 240 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms