Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC6A4P31645 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AC013244.3-201ENST00000605614 388 ntBASIC6.64□□□□□ -1.35
SLC6A4P31645 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AL445647.2-201ENST00000615170 130 ntBASIC6.64□□□□□ -1.35
SLC6A4P31645 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AC097655.1-201ENST00000635075 318 ntBASIC6.64□□□□□ -1.35
SLC6A4P31645 AL121936.2-201ENST00000641935 662 ntBASIC6.64□□□□□ -1.35
SLC6A4P31645 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 AC087565.3-202ENST00000642085 1603 ntBASIC6.64□□□□□ -1.35
SLC6A4P31645 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
SLC6A4P31645 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
SLC6A4P31645 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.64□□□□□ -1.35
SLC6A4P31645 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
SLC6A4P31645 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC005332.9-201ENST00000620266 2921 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 RNA5SP279-201ENST00000365513 117 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 MIR1275-201ENST00000408770 80 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 RNU6-584P-201ENST00000410350 95 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC017035.1-201ENST00000411999 1115 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC6A4P31645 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 FO082842.1-201ENST00000423552 1370 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC011242.1-201ENST00000433596 1158 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 Z80107.1-201ENST00000436830 412 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.63□□□□□ -1.35
SLC6A4P31645 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 RN7SL552P-201ENST00000462094 276 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC005017.1-201ENST00000482002 490 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC112484.3-201ENST00000505910 329 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC112198.4-201ENST00000515450 351 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 Vault.2-201ENST00000516519 98 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC009729.1-201ENST00000548873 1133 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC005632.2-201ENST00000564271 828 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC027281.1-201ENST00000574178 758 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 MIR5095-201ENST00000578844 88 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC010624.4-201ENST00000597606 1351 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AL078623.1-201ENST00000602702 907 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AL357094.1-201ENST00000603845 844 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 AL445649.1-201ENST00000615941 691 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 AL137918.1-201ENST00000624542 1922 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC007683.2-201ENST00000624681 714 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 CASC19-243ENST00000641588 1546 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 CASC19-246ENST00000641625 1606 ntBASIC6.63□□□□□ -1.35
SLC6A4P31645 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
SLC6A4P31645 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
SLC6A4P31645 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
SLC6A4P31645 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.62□□□□□ -1.35
SLC6A4P31645 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
SLC6A4P31645 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.62□□□□□ -1.35
SLC6A4P31645 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
SLC6A4P31645 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 1036.8 ms