Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MRPS21P2-201ENST00000424704 264 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH3P22223 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 MED28P4-201ENST00000433137 572 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AL354893.1-201ENST00000433735 348 ntBASIC6.19□□□□□ -1.42
CDH3P22223 OR2L9P-201ENST00000444456 913 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AL161722.1-201ENST00000446972 1032 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AC093166.3-201ENST00000448785 303 ntBASIC6.19□□□□□ -1.42
CDH3P22223 OR52E7P-201ENST00000452394 933 ntBASIC6.19□□□□□ -1.42
CDH3P22223 OR9A1P-202ENST00000484361 945 ntBASIC6.19□□□□□ -1.42
CDH3P22223 RN7SL362P-201ENST00000494228 267 ntBASIC6.19□□□□□ -1.42
CDH3P22223 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.19□□□□□ -1.42
CDH3P22223 NPM1P21-201ENST00000513394 762 ntBASIC6.19□□□□□ -1.42
CDH3P22223 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH3P22223 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 AC008055.1-201ENST00000547032 609 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.19□□□□□ -1.42
CDH3P22223 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH3P22223 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH3P22223 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC6.19□□□□□ -1.42
CDH3P22223 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 AL137246.2-201ENST00000613439 662 ntBASIC6.19□□□□□ -1.42
CDH3P22223 AL683826.1-201ENST00000624104 627 ntBASIC6.19□□□□□ -1.42
CDH3P22223 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 CASC19-274ENST00000642018 970 ntBASIC6.19□□□□□ -1.42
CDH3P22223 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CDH3P22223 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CDH3P22223 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 AC005725.1-201ENST00000577346 2607 ntBASIC6.18□□□□□ -1.42
CDH3P22223 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 CASC19-246ENST00000641625 1606 ntBASIC6.18□□□□□ -1.42
CDH3P22223 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 AL353743.3-201ENST00000442109 1468 ntBASIC6.18□□□□□ -1.42
CDH3P22223 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.18□□□□□ -1.42
CDH3P22223 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 RN7SKP186-201ENST00000365371 303 ntBASIC6.18□□□□□ -1.42
CDH3P22223 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 VN1R12P-201ENST00000403778 876 ntBASIC6.18□□□□□ -1.42
CDH3P22223 MIR1275-201ENST00000408770 80 ntBASIC6.18□□□□□ -1.42
CDH3P22223 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 AKR1B10P1-201ENST00000425765 942 ntBASIC6.18□□□□□ -1.42
CDH3P22223 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 GTF2IP14-201ENST00000441415 586 ntBASIC6.18□□□□□ -1.42
CDH3P22223 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 AL355355.1-201ENST00000442900 793 ntBASIC6.18□□□□□ -1.42
CDH3P22223 CXCR2P1-202ENST00000443392 1074 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AC104339.1-201ENST00000465478 348 ntBASIC6.18□□□□□ -1.42
CDH3P22223 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 NPIPB14P-203ENST00000532298 987 ntBASIC6.18□□□□□ -1.42
CDH3P22223 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 AC009729.1-201ENST00000548873 1133 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 TPRX1P1-201ENST00000557620 319 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 AC005632.2-201ENST00000564271 828 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 AL078601.3-201ENST00000573303 535 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 AC073046.2-201ENST00000604756 527 ntBASIC6.18□□□□□ -1.42
CDH3P22223 MIR6721-201ENST00000617181 87 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 AL132640.3-201ENST00000630473 177 ntBASIC6.18□□□□□ -1.42
CDH3P22223 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.18□□□□□ -1.42
CDH3P22223 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CDH3P22223 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.18□□□□□ -1.42
CDH3P22223 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CDH3P22223 AC092724.1-201ENST00000624623 3397 ntBASIC6.17□□□□□ -1.42
CDH3P22223 AC092070.2-203ENST00000598377 3644 ntBASIC6.17□□□□□ -1.42
CDH3P22223 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.17□□□□□ -1.42
CDH3P22223 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CDH3P22223 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms