Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
VCLP18206 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
VCLP18206 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.29□□□□□ -1.4
VCLP18206 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VCLP18206 AC005725.1-201ENST00000577346 2607 ntBASIC6.29□□□□□ -1.4
VCLP18206 CASC19-246ENST00000641625 1606 ntBASIC6.28□□□□□ -1.4
VCLP18206 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 AL353743.3-201ENST00000442109 1468 ntBASIC6.28□□□□□ -1.4
VCLP18206 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.28□□□□□ -1.4
VCLP18206 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.28□□□□□ -1.4
VCLP18206 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 ZNF101P1-201ENST00000435701 1720 ntBASIC6.28□□□□□ -1.4
VCLP18206 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.28□□□□□ -1.4
VCLP18206 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VCLP18206 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.28□□□□□ -1.4
VCLP18206 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 AC099535.1-201ENST00000408928 371 ntBASIC6.28□□□□□ -1.4
VCLP18206 U3.43-201ENST00000410734 213 ntBASIC6.28□□□□□ -1.4
VCLP18206 AC099782.1-201ENST00000425889 474 ntBASIC6.28□□□□□ -1.4
VCLP18206 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.28□□□□□ -1.4
VCLP18206 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.28□□□□□ -1.4
VCLP18206 AC114728.1-201ENST00000488289 483 ntBASIC6.28□□□□□ -1.4
VCLP18206 AL117692.1-201ENST00000494283 713 ntBASIC6.28□□□□□ -1.4
VCLP18206 IGHV4-55-201ENST00000520889 368 ntBASIC6.28□□□□□ -1.4
VCLP18206 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.28□□□□□ -1.4
VCLP18206 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.28□□□□□ -1.4
VCLP18206 MIR3154-201ENST00000577829 84 ntBASIC6.28□□□□□ -1.4
VCLP18206 AC009779.8-202ENST00000607990 932 ntBASIC6.28□□□□□ -1.4
VCLP18206 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.28□□□□□ -1.4
VCLP18206 AC024255.1-201ENST00000614376 102 ntBASIC6.28□□□□□ -1.4
VCLP18206 uc_338.29-201ENST00000615099 168 ntBASIC6.28□□□□□ -1.4
VCLP18206 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 AP000550.3-201ENST00000637734 379 ntBASIC6.28□□□□□ -1.4
VCLP18206 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VCLP18206 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 WDR95P-201ENST00000425638 1542 ntBASIC6.28□□□□□ -1.4
VCLP18206 AC090181.3-201ENST00000624777 1514 ntBASIC6.28□□□□□ -1.4
VCLP18206 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VCLP18206 AL591135.1-201ENST00000401578 5914 ntBASIC6.28□□□□□ -1.4
VCLP18206 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
VCLP18206 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VCLP18206 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
VCLP18206 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.27□□□□□ -1.41
VCLP18206 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCLP18206 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.27□□□□□ -1.41
VCLP18206 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.27□□□□□ -1.41
VCLP18206 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.27□□□□□ -1.41
VCLP18206 AL359976.1-201ENST00000418655 3528 ntBASIC6.27□□□□□ -1.41
VCLP18206 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCLP18206 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCLP18206 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.27□□□□□ -1.41
VCLP18206 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
VCLP18206 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCLP18206 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
VCLP18206 RNA5SP478-201ENST00000364657 115 ntBASIC6.27□□□□□ -1.41
VCLP18206 VN1R20P-201ENST00000425215 966 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.27□□□□□ -1.41
VCLP18206 IGLV3-4-201ENST00000432300 244 ntBASIC6.27□□□□□ -1.41
VCLP18206 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.27□□□□□ -1.41
VCLP18206 AC009237.1-201ENST00000442127 744 ntBASIC6.27□□□□□ -1.41
VCLP18206 OR13K1P-201ENST00000444577 975 ntBASIC6.27□□□□□ -1.41
VCLP18206 snoU13.29-201ENST00000459370 104 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.27□□□□□ -1.41
VCLP18206 RN7SL552P-201ENST00000462094 276 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.27□□□□□ -1.41
VCLP18206 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.27□□□□□ -1.41
VCLP18206 RN7SL362P-201ENST00000494228 267 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC122718.2-201ENST00000505325 591 ntBASIC6.27□□□□□ -1.41
VCLP18206 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCLP18206 HMGN1P16-201ENST00000508308 283 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC010343.2-201ENST00000510162 224 ntBASIC6.27□□□□□ -1.41
VCLP18206 KHDC1P1-201ENST00000511053 508 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC108103.1-201ENST00000511286 446 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.27□□□□□ -1.41
VCLP18206 RN7SKP183-201ENST00000517169 324 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.27□□□□□ -1.41
VCLP18206 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.27□□□□□ -1.41
VCLP18206 NPIPB14P-203ENST00000532298 987 ntBASIC6.27□□□□□ -1.41
VCLP18206 AL121579.2-201ENST00000555466 590 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.27□□□□□ -1.41
VCLP18206 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
VCLP18206 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
VCLP18206 AC073046.2-201ENST00000604756 527 ntBASIC6.27□□□□□ -1.41
VCLP18206 AC024589.2-201ENST00000605642 1294 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms