Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.36□□□□□ -1.55
CTLA4P16410 HMGN1P17-201ENST00000513734 295 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 AP001000.1-201ENST00000526843 742 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.36□□□□□ -1.55
CTLA4P16410 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTLA4P16410 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.36□□□□□ -1.55
CTLA4P16410 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.36□□□□□ -1.55
CTLA4P16410 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 AC005479.3-201ENST00000602790 431 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 SMIM12P1-201ENST00000603004 274 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 AL135999.3-201ENST00000610501 812 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 uc_338.26-201ENST00000612659 160 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 RFPL4AP6-201ENST00000616792 846 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.36□□□□□ -1.55
CTLA4P16410 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTLA4P16410 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.36□□□□□ -1.55
CTLA4P16410 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTLA4P16410 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CTLA4P16410 AC007159.1-201ENST00000566529 4706 ntBASIC5.36□□□□□ -1.55
CTLA4P16410 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CTLA4P16410 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTLA4P16410 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 AL359955.1-201ENST00000455242 3275 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 SNORA21-201ENST00000362423 132 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CTLA4P16410 AL132875.1-201ENST00000403623 949 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.35□□□□□ -1.55
CTLA4P16410 RPL35AP31-201ENST00000418340 337 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 USP24P1-201ENST00000433802 779 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 CUBNP2-201ENST00000443534 1139 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 AC016027.4-201ENST00000450866 277 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 RPL29P23-201ENST00000486188 442 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 TRBV5-2-201ENST00000489095 273 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 CR383658.1-201ENST00000514609 734 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 AC116917.1-201ENST00000520558 305 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 MIR744-201ENST00000578242 98 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.35□□□□□ -1.55
CTLA4P16410 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.35□□□□□ -1.55
CTLA4P16410 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 AC096861.1-201ENST00000616652 240 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 MAPK10-350ENST00000641777 965 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
CTLA4P16410 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CTLA4P16410 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CTLA4P16410 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 AL161756.3-201ENST00000641216 2071 ntBASIC5.35□□□□□ -1.55
CTLA4P16410 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTLA4P16410 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.34□□□□□ -1.55
CTLA4P16410 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTLA4P16410 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CTLA4P16410 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CTLA4P16410 AC078880.4-201ENST00000617627 1749 ntBASIC5.34□□□□□ -1.55
CTLA4P16410 AP003486.1-201ENST00000525716 3994 ntBASIC5.34□□□□□ -1.55
CTLA4P16410 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms